Variant report

Variant rs3752416
Chromosome Location chr6:26045929-26045930
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26034400-26048200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:26043000-26046600 Active TSS HUES6 Cell Line embryonic stem cell
3 chr6:26043200-26046000 Active TSS Colon Smooth Muscle Colon
4 chr6:26043200-26046200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr6:26043200-26046200 Flanking Active TSS Primary hematopoietic stem cells blood
6 chr6:26043200-26046200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
7 chr6:26043200-26046200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr6:26043200-26046200 Active TSS Brain Anterior Caudate brain
9 chr6:26043200-26046400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr6:26043200-26046400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
11 chr6:26043200-26046600 Active TSS ES-I3 Cell Line embryonic stem cell
12 chr6:26043200-26046600 Active TSS iPS-15b Cell Line embryonic stem cell
13 chr6:26043200-26046600 Active TSS iPS-20b Cell Line embryonic stem cell
14 chr6:26043200-26046800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr6:26043400-26046000 Active TSS Pancreatic Islets Pancreatic Islet
16 chr6:26043400-26046000 Active TSS HSMMtube muscle
17 chr6:26043400-26046200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
18 chr6:26043400-26046400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
19 chr6:26043400-26046600 Active TSS H9 Cell Line embryonic stem cell
20 chr6:26043400-26046600 Active TSS HUES48 Cell Line embryonic stem cell
21 chr6:26043400-26046600 Active TSS A549 lung
22 chr6:26043400-26046600 Flanking Active TSS NHEK skin
23 chr6:26043600-26046200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr6:26043800-26046000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr6:26043800-26046000 Active TSS Primary T killer memory cells from peripheral blood blood
26 chr6:26043800-26046000 Active TSS Hela-S3 cervix
27 chr6:26043800-26046200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
28 chr6:26043800-26046400 Active TSS Brain Inferior Temporal Lobe brain
29 chr6:26043800-26046400 Active TSS NHDF-Ad bronchial
30 chr6:26043800-26046600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
31 chr6:26044000-26046000 Active TSS Fetal Heart heart
32 chr6:26044200-26046000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
33 chr6:26044200-26046000 Active TSS Small Intestine intestine
34 chr6:26044200-26046200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
35 chr6:26044200-26046200 Flanking Active TSS Primary B cells from cord blood blood
36 chr6:26044200-26046200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr6:26044200-26046600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:26044200-26046600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
39 chr6:26044200-26046600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr6:26044200-26046600 Flanking Active TSS Muscle Satellite Cultured Cells --
41 chr6:26044200-26046600 Flanking Active TSS HMEC breast
42 chr6:26044200-26046800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
43 chr6:26044400-26046000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr6:26044600-26054800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr6:26044600-26055000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr6:26045000-26046600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
47 chr6:26045200-26046200 Active TSS HUES64 Cell Line embryonic stem cell
48 chr6:26045200-26046400 Active TSS Brain Germinal Matrix brain
49 chr6:26045400-26046200 Active TSS iPS-18 Cell Line embryonic stem cell
50 chr6:26045400-26046200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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