Variant report

Variant rs3756857
Chromosome Location chr6:34858578-34858579
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:34854400-34859200 Active TSS HUES48 Cell Line embryonic stem cell
2 chr6:34854600-34858600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
3 chr6:34854600-34858600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:34854600-34858800 Active TSS H9 Cell Line embryonic stem cell
5 chr6:34854600-34858800 Active TSS HUES6 Cell Line embryonic stem cell
6 chr6:34854600-34858800 Active TSS Right Ventricle heart
7 chr6:34854600-34859000 Active TSS ES-I3 Cell Line embryonic stem cell
8 chr6:34854800-34858600 Active TSS Pancreatic Islets Pancreatic Islet
9 chr6:34854800-34858800 Active TSS Breast Myoepithelial Primary Cells Breast
10 chr6:34855000-34858800 Active TSS Ovary ovary
11 chr6:34855400-34858800 Active TSS Brain Inferior Temporal Lobe brain
12 chr6:34857400-34858600 Flanking Active TSS Primary B cells from cord blood blood
13 chr6:34857400-34859200 Active TSS Right Atrium heart
14 chr6:34857600-34858600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
15 chr6:34857600-34858600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
16 chr6:34857600-34858600 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
17 chr6:34857600-34858800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr6:34857600-34859200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
19 chr6:34857800-34858600 Flanking Active TSS Primary T cells from cord blood blood
20 chr6:34857800-34858600 Flanking Active TSS Adipose Nuclei Adipose
21 chr6:34857800-34858600 Enhancers Placenta Amnion Placenta Amnion
22 chr6:34857800-34858600 Flanking Active TSS Stomach Smooth Muscle stomach
23 chr6:34857800-34858600 Flanking Active TSS Thymus Thymus
24 chr6:34857800-34859000 Flanking Active TSS Fetal Muscle Leg muscle
25 chr6:34857800-34859000 Flanking Active TSS Dnd41 blood
26 chr6:34857800-34859200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr6:34857800-34869200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr6:34858000-34858600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:34858000-34858600 Flanking Active TSS Muscle Satellite Cultured Cells --
30 chr6:34858000-34858600 Flanking Active TSS Brain Cingulate Gyrus brain
31 chr6:34858000-34858600 Flanking Active TSS Fetal Intestine Small intestine
32 chr6:34858000-34858600 Flanking Active TSS Fetal Stomach stomach
33 chr6:34858000-34858600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
34 chr6:34858000-34858800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:34858000-34858800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:34858000-34858800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
37 chr6:34858000-34858800 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr6:34858000-34858800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr6:34858000-34859000 Enhancers Primary B cells from peripheral blood blood
40 chr6:34858000-34859000 Enhancers Sigmoid Colon Sigmoid Colon
41 chr6:34858000-34860200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr6:34858000-34877600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr6:34858200-34858600 Flanking Active TSS H1 Cell Line embryonic stem cell
44 chr6:34858200-34858600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:34858200-34858600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
46 chr6:34858200-34858600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr6:34858200-34858600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
48 chr6:34858200-34858600 Enhancers Primary T cells fromperipheralblood blood
49 chr6:34858200-34858600 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr6:34858200-34858600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin

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