Variant report

Variant rs3761280
Chromosome Location chr20:23620076-23620077
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23618600-23620200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr20:23618600-23620400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr20:23618600-23620800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr20:23618600-23621000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr20:23618600-23621200 Weak transcription Ovary ovary
6 chr20:23618600-23621200 Weak transcription GM12878-XiMat blood
7 chr20:23618600-23621600 Weak transcription Liver Liver
8 chr20:23618600-23621600 Weak transcription Brain Hippocampus Middle brain
9 chr20:23618600-23621800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr20:23618600-23621800 Weak transcription Left Ventricle heart
11 chr20:23618600-23622000 Weak transcription HUVEC blood vessel
12 chr20:23618600-23622200 Weak transcription Muscle Satellite Cultured Cells --
13 chr20:23618600-23622400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr20:23618600-23622400 Weak transcription NHDF-Ad bronchial
15 chr20:23618600-23622400 Weak transcription NHLF lung
16 chr20:23618600-23622600 Weak transcription Brain Anterior Caudate brain
17 chr20:23618600-23622600 Weak transcription Brain Substantia Nigra brain
18 chr20:23618600-23622600 Weak transcription Colon Smooth Muscle Colon
19 chr20:23618600-23624800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr20:23618600-23626000 Weak transcription Gastric stomach
21 chr20:23618800-23620400 Enhancers A549 lung
22 chr20:23618800-23620600 Weak transcription Fetal Intestine Large intestine
23 chr20:23618800-23620800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr20:23618800-23621000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr20:23618800-23621200 Weak transcription H1 Cell Line embryonic stem cell
26 chr20:23618800-23621200 Weak transcription Psoas Muscle Psoas
27 chr20:23618800-23621400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr20:23618800-23621400 Weak transcription Primary B cells from cord blood blood
29 chr20:23618800-23621400 Weak transcription HSMMtube muscle
30 chr20:23618800-23621600 Weak transcription Brain Cingulate Gyrus brain
31 chr20:23618800-23621600 Weak transcription Pancreas Pancrea
32 chr20:23618800-23621600 Weak transcription HSMM muscle
33 chr20:23618800-23621800 Enhancers Monocytes-CD14+_RO01746 blood
34 chr20:23618800-23622000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr20:23618800-23622000 Enhancers Placenta Placenta
36 chr20:23618800-23622000 Weak transcription Stomach Smooth Muscle stomach
37 chr20:23618800-23622200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr20:23618800-23622400 Weak transcription Fetal Lung lung
39 chr20:23618800-23622400 Weak transcription Osteobl bone
40 chr20:23618800-23622600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr20:23618800-23622600 Weak transcription Right Atrium heart
42 chr20:23618800-23623000 Weak transcription Placenta Amnion Placenta Amnion
43 chr20:23618800-23623000 Weak transcription NH-A brain
44 chr20:23618800-23625200 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr20:23618800-23626400 Weak transcription Primary hematopoietic stem cells blood
46 chr20:23618800-23628600 Enhancers Primary monocytes fromperipheralblood blood
47 chr20:23619000-23620800 Weak transcription Thymus Thymus
48 chr20:23619000-23622400 Flanking Active TSS HepG2 liver
49 chr20:23619200-23620200 Weak transcription Colonic Mucosa Colon
50 chr20:23619200-23620200 Weak transcription Fetal Intestine Small intestine

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