Variant report

Variant rs3827141
Chromosome Location chr20:23616492-23616493
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23600600-23617000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr20:23602000-23616800 Weak transcription H1 Cell Line embryonic stem cell
3 chr20:23604000-23616600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr20:23604000-23616800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr20:23606600-23617000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr20:23606800-23616600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr20:23609800-23616800 Weak transcription Primary hematopoietic stem cells blood
8 chr20:23610200-23616800 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr20:23610200-23617000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr20:23610200-23617000 Weak transcription K562 blood
11 chr20:23610400-23616800 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr20:23610400-23616800 Weak transcription NH-A brain
13 chr20:23610400-23618200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr20:23610600-23616800 Weak transcription Hela-S3 cervix
15 chr20:23610800-23616800 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr20:23610800-23617400 Weak transcription H9 Cell Line embryonic stem cell
17 chr20:23612000-23617000 Genic enhancers Fetal Muscle Trunk muscle
18 chr20:23612600-23616600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr20:23612600-23616600 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr20:23612600-23617200 Genic enhancers Fetal Muscle Leg muscle
21 chr20:23612800-23617200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr20:23613000-23616800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr20:23613800-23617200 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr20:23614200-23616600 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr20:23614400-23616600 Enhancers Psoas Muscle Psoas
26 chr20:23614600-23616600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr20:23614600-23617200 Genic enhancers Gastric stomach
28 chr20:23614600-23617400 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
29 chr20:23614800-23616600 Weak transcription Placenta Amnion Placenta Amnion
30 chr20:23614800-23617200 Genic enhancers Lung lung
31 chr20:23614800-23617200 Genic enhancers Spleen Spleen
32 chr20:23614800-23617400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
33 chr20:23614800-23617400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
34 chr20:23615000-23616600 Enhancers Right Atrium heart
35 chr20:23615000-23616600 Enhancers HSMMtube muscle
36 chr20:23615000-23616800 Weak transcription Thymus Thymus
37 chr20:23615000-23616800 Weak transcription A549 lung
38 chr20:23615000-23617000 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
39 chr20:23615000-23618000 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
40 chr20:23615200-23617000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr20:23615200-23617000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr20:23615200-23617000 Transcr. at gene 5' and 3' HepG2 liver
43 chr20:23615400-23616600 Genic enhancers NHEK skin
44 chr20:23615400-23616600 Genic enhancers NHLF lung
45 chr20:23615400-23616800 Enhancers Brain Germinal Matrix brain
46 chr20:23615400-23617200 Enhancers Placenta Placenta
47 chr20:23615600-23617000 Genic enhancers Fetal Lung lung
48 chr20:23615600-23617200 Enhancers HUVEC blood vessel
49 chr20:23615600-23617400 Transcr. at gene 5' and 3' H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr20:23615600-23617400 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood

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