Variant report

Variant rs3785625
Chromosome Location chr17:16190418-16190419
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16166200-16205400 Weak transcription Brain Hippocampus Middle brain
2 chr17:16181200-16205400 Weak transcription Dnd41 blood
3 chr17:16184600-16191600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr17:16186800-16191000 Enhancers Fetal Lung lung
5 chr17:16186800-16191400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr17:16187200-16205200 Weak transcription Brain Inferior Temporal Lobe brain
7 chr17:16187800-16190600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr17:16187800-16191000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr17:16188200-16191200 Enhancers Sigmoid Colon Sigmoid Colon
10 chr17:16188800-16190600 Genic enhancers Fetal Intestine Small intestine
11 chr17:16188800-16190600 Enhancers Lung lung
12 chr17:16188800-16190800 Enhancers Fetal Stomach stomach
13 chr17:16188800-16191400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr17:16188800-16191400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr17:16188800-16191600 Enhancers Primary mononuclear cells fromperipheralblood Blood
16 chr17:16188800-16194600 Enhancers Fetal Intestine Large intestine
17 chr17:16189000-16190600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
18 chr17:16189000-16190600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
19 chr17:16189000-16190600 Flanking Active TSS HepG2 liver
20 chr17:16189000-16190800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
21 chr17:16189000-16190800 Enhancers Brain Anterior Caudate brain
22 chr17:16189000-16190800 Enhancers Fetal Muscle Trunk muscle
23 chr17:16189000-16190800 Enhancers Fetal Muscle Leg muscle
24 chr17:16189000-16190800 Enhancers Spleen Spleen
25 chr17:16189000-16191200 Flanking Active TSS Adipose Nuclei Adipose
26 chr17:16189000-16191200 Enhancers Fetal Heart heart
27 chr17:16189000-16191400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr17:16189000-16191400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
29 chr17:16189000-16191400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
30 chr17:16189000-16191400 Enhancers Placenta Amnion Placenta Amnion
31 chr17:16189000-16191400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
32 chr17:16189000-16191400 Flanking Active TSS GM12878-XiMat blood
33 chr17:16189000-16191400 Flanking Active TSS HUVEC blood vessel
34 chr17:16189000-16191600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
35 chr17:16189000-16191600 Flanking Active TSS Primary B cells from cord blood blood
36 chr17:16189000-16191600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr17:16189000-16191600 Enhancers Fetal Kidney kidney
38 chr17:16189000-16191800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
39 chr17:16189200-16190600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr17:16189200-16190600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
41 chr17:16189200-16190600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr17:16189200-16190600 Enhancers Esophagus oesophagus
43 chr17:16189200-16190600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
44 chr17:16189200-16190800 Flanking Active TSS Primary B cells from peripheral blood blood
45 chr17:16189200-16190800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
46 chr17:16189200-16190800 Enhancers Pancreas Pancrea
47 chr17:16189200-16190800 Flanking Active TSS Rectal Smooth Muscle rectum
48 chr17:16189200-16191000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
49 chr17:16189200-16191400 Flanking Active TSS Primary monocytes fromperipheralblood blood
50 chr17:16189400-16190600 Enhancers Brain Cingulate Gyrus brain

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