Variant report

Variant rs178657
Chromosome Location chr17:16057933-16057934
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16006600-16064200 Strong transcription Rectal Mucosa Donor 29 rectum
2 chr17:16015600-16077600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr17:16015800-16064400 Strong transcription Primary T cells fromperipheralblood blood
4 chr17:16016400-16064200 Strong transcription Primary T regulatory cells fromperipheralblood blood
5 chr17:16017200-16064200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr17:16019400-16070400 Strong transcription Primary monocytes fromperipheralblood blood
7 chr17:16020200-16064200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr17:16021800-16087600 Weak transcription Fetal Brain Male brain
9 chr17:16022200-16058400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr17:16032800-16058400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr17:16033000-16058000 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr17:16034800-16058600 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr17:16034800-16061800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr17:16035400-16064600 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr17:16035800-16103400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr17:16036800-16059800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr17:16039200-16096800 Weak transcription K562 blood
18 chr17:16039400-16059000 Weak transcription Stomach Mucosa stomach
19 chr17:16041200-16059800 Strong transcription Duodenum Mucosa Duodenum
20 chr17:16041200-16063200 Strong transcription Primary T helper cells PMA-I stimulated --
21 chr17:16042000-16094200 Weak transcription Psoas Muscle Psoas
22 chr17:16042600-16060200 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr17:16043400-16065800 Strong transcription Primary B cells from peripheral blood blood
24 chr17:16043600-16064400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr17:16044000-16059200 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr17:16045200-16069800 Strong transcription Dnd41 blood
27 chr17:16046800-16059800 Weak transcription Fetal Heart heart
28 chr17:16046800-16064600 Weak transcription H9 Cell Line embryonic stem cell
29 chr17:16047800-16058800 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr17:16048400-16064000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr17:16048400-16088000 Weak transcription Fetal Brain Female brain
32 chr17:16049200-16058400 Strong transcription Fetal Lung lung
33 chr17:16049200-16059000 Weak transcription Pancreas Pancrea
34 chr17:16049200-16063600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr17:16049200-16077600 Weak transcription Right Ventricle heart
36 chr17:16049200-16088600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr17:16049200-16093200 Weak transcription Aorta Aorta
38 chr17:16049200-16103400 Weak transcription Spleen Spleen
39 chr17:16049200-16108600 Weak transcription Esophagus oesophagus
40 chr17:16049400-16062000 Weak transcription Brain Substantia Nigra brain
41 chr17:16049400-16062400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr17:16049400-16064200 Strong transcription Primary T cells from cord blood blood
43 chr17:16049600-16058400 Strong transcription HSMM muscle
44 chr17:16049600-16058600 Strong transcription Adipose Nuclei Adipose
45 chr17:16050000-16058400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr17:16050800-16063000 Strong transcription GM12878-XiMat blood
47 chr17:16050800-16064200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr17:16051800-16059200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr17:16051800-16073800 Weak transcription Left Ventricle heart
50 chr17:16051800-16089400 Weak transcription Brain Germinal Matrix brain

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