Variant report

Variant	rs3760298
Chromosome Location	chr17:15905190-15905191
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:13)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:13 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CBX3	chr17:15904902-15905220	K562	blood:	n/a	n/a
2	CBX3	chr17:15904803-15905265	K562	blood:	n/a	n/a
3	KAP1	chr17:15904539-15905416	K562	blood:	n/a	n/a
4	POLR2A	chr17:15902878-15905437	A549	lung:	n/a	n/a
5	ZKSCAN1	chr17:15904966-15905205	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr17:15902379-15905378	IMR90	lung:	n/a	n/a
7	TRIM28	chr17:15904795-15905238	K562	blood:	n/a	n/a
8	SETDB1	chr17:15904498-15905386	U2OS	brain:	n/a	n/a
9	POLR2A	chr17:15904672-15905368	K562	blood:	n/a	n/a
10	POLR2A	chr17:15904759-15905236	HepG2	liver:	n/a	n/a
11	KAP1	chr17:15904044-15905382	HEK293	kidney:	n/a	n/a
12	ZNF263	chr17:15902538-15905319	HEK293-T-REx	kidney:	n/a	chr17:15902998-15903019
13	CTCF	chr17:15900787-15905501	A549	lung:	n/a	chr17:15901970-15901988 chr17:15901965-15901986

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:15903246..15906052-chr17:15922157..15923827,2	K562	blood:
2	chr17:15876176..15878196-chr17:15903917..15906445,2	K562	blood:
3	chr17:15905164..15907778-chr17:15930822..15933599,2	K562	blood:
4	chr17:15903242..15905259-chr17:15927209..15928896,2	K562	blood:
5	chr17:15904178..15905978-chr17:15910048..15912649,2	K562	blood:
6	chr17:15845973..15849997-chr17:15902965..15906205,4	K562	blood:
7	chr17:15902955..15905510-chr17:16117213..16119076,2	K562	blood:

No data

Variant related genes	Relation type
ZSWIM7	TF binding region
ENSG00000141027	Chromatin interaction
ENSG00000170425	Chromatin interaction
ENSG00000011295	Chromatin interaction

Extended variants
information (count: 138 )
Associated
traits (count: 15 )

rSNPs within LD-proxies of this variant (count:120)

rs_ID	r²[population]
rs10491104	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1065822	0.96[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1075901	0.81[CEU][hapmap];0.88[GIH][hapmap];0.84[JPT][hapmap];0.81[EUR][1000 genomes]
rs1079533	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11078321	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11078327	0.80[EUR][1000 genomes]
rs11078328	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11078330	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11078331	0.80[EUR][1000 genomes]
rs1125156	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1126148	0.81[AMR][1000 genomes]
rs1160109	0.96[CEU][hapmap]
rs11650678	0.96[CEU][hapmap]
rs11651290	0.96[CEU][hapmap];0.90[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.98[TSI][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11651508	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11652025	0.81[EUR][1000 genomes]
rs11655456	0.82[EUR][1000 genomes]
rs11656046	0.81[EUR][1000 genomes]
rs11657160	0.82[CEU][hapmap];0.85[JPT][hapmap];0.81[EUR][1000 genomes]
rs11657912	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11868809	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11869450	0.81[EUR][1000 genomes]
rs11869563	0.81[EUR][1000 genomes]
rs11871961	0.85[EUR][1000 genomes]
rs11872032	0.96[CEU][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12451075	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12942295	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12945546	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12947205	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12948361	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs178657	0.96[CEU][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap]
rs178805	0.96[CEU][hapmap]
rs178809	0.96[CEU][hapmap]
rs178814	0.82[CEU][hapmap];0.85[JPT][hapmap]
rs178815	0.82[CEU][hapmap];0.84[GIH][hapmap];0.85[JPT][hapmap]
rs178816	0.96[CEU][hapmap]
rs178820	0.96[CEU][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap]
rs178822	0.82[CEU][hapmap];0.84[GIH][hapmap];0.85[JPT][hapmap];0.81[TSI][hapmap]
rs178837	0.88[CEU][hapmap];0.86[MEX][hapmap];0.91[TSI][hapmap]
rs178838	0.81[CEU][hapmap];0.85[JPT][hapmap]
rs178839	0.82[CEU][hapmap]
rs1989856	0.96[CEU][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap]
rs2015353	0.92[CEU][hapmap];0.92[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2041459	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2041460	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2051736	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2078050	0.82[CEU][hapmap];0.86[GIH][hapmap];0.85[JPT][hapmap]
rs2157990	0.90[GIH][hapmap];0.92[JPT][hapmap];0.81[EUR][1000 genomes]
rs2157991	0.82[CEU][hapmap];0.88[GIH][hapmap];0.85[JPT][hapmap];0.81[TSI][hapmap];0.81[EUR][1000 genomes]
rs2157992	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2285582	0.81[EUR][1000 genomes]
rs2301651	0.83[ASN][1000 genomes]
rs2301652	0.87[TSI][hapmap]
rs2324084	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2324141	0.82[CEU][hapmap];0.84[GIH][hapmap];0.85[JPT][hapmap];0.81[TSI][hapmap]
rs2324142	0.82[CEU][hapmap];0.84[GIH][hapmap];0.85[JPT][hapmap]
rs2779211	0.96[CEU][hapmap];0.89[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34236618	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35168566	0.81[EUR][1000 genomes]
rs36001065	0.81[EUR][1000 genomes]
rs3760297	0.82[EUR][1000 genomes]
rs3785628	0.82[CEU][hapmap];0.88[GIH][hapmap];0.85[JPT][hapmap];0.81[EUR][1000 genomes]
rs3785631	0.96[CEU][hapmap];0.95[GIH][hapmap];0.83[JPT][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3785633	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3815038	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3815039	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3826360	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4239134	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4435297	0.85[CEU][hapmap];0.88[GIH][hapmap];0.84[JPT][hapmap];0.81[TSI][hapmap]
rs4791660	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4791661	0.85[EUR][1000 genomes]
rs4791662	0.96[CEU][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4792709	0.81[EUR][1000 genomes]
rs4792711	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4792712	0.82[EUR][1000 genomes]
rs4792713	0.82[EUR][1000 genomes]
rs4792715	0.81[EUR][1000 genomes]
rs4792716	0.81[EUR][1000 genomes]
rs4792717	0.82[CEU][hapmap];0.85[JPT][hapmap];0.81[EUR][1000 genomes]
rs4792719	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4792721	0.86[GIH][hapmap];0.85[TSI][hapmap]
rs55676330	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62073587	0.83[EUR][1000 genomes]
rs6416868	0.81[CEU][hapmap];0.81[EUR][1000 genomes]
rs6502482	0.82[CEU][hapmap];0.85[JPT][hapmap];0.83[EUR][1000 genomes]
rs6502488	0.82[CEU][hapmap];0.85[JPT][hapmap];0.81[EUR][1000 genomes]
rs7207889	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7209094	0.82[EUR][1000 genomes]
rs7210655	0.82[EUR][1000 genomes]
rs7214695	0.81[CEU][hapmap];0.85[JPT][hapmap]
rs7214891	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7216949	0.81[EUR][1000 genomes]
rs7217614	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7223346	0.82[CEU][hapmap];0.88[GIH][hapmap];0.85[JPT][hapmap];0.81[TSI][hapmap]
rs72833498	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs758853	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8065190	0.81[EUR][1000 genomes]
rs8070859	0.81[EUR][1000 genomes]
rs8076669	0.83[EUR][1000 genomes]
rs8076864	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8079969	0.82[CEU][hapmap];0.84[GIH][hapmap];0.85[JPT][hapmap];0.81[TSI][hapmap]
rs8080706	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9652827	0.81[EUR][1000 genomes]
rs9652828	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9709250	0.81[EUR][1000 genomes]
rs9889745	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9889822	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9890012	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9891379	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9896441	0.80[EUR][1000 genomes]
rs9897542	0.81[EUR][1000 genomes]
rs9898313	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9899002	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9902141	0.96[CEU][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap]
rs9903464	0.88[CEU][hapmap];0.86[MEX][hapmap];0.91[TSI][hapmap]
rs9905429	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9908031	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9909615	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9909697	0.96[CEU][hapmap]
rs9916868	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934185	chr17:15552960-16551197	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	190 gene(s)	inside rSNPs	diseases
2	nsv1066023	chr17:15607267-16053512	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	esv3330182	chr17:15652014-16569534	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	177 gene(s)	inside rSNPs	diseases
4	esv3446844	chr17:15654843-16572246	Enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	177 gene(s)	inside rSNPs	diseases
5	nsv1061222	chr17:15672934-15999778	ZNF genes & repeats Weak transcription Enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
6	nsv907706	chr17:15731923-16056442	ZNF genes & repeats Weak transcription Enhancers Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
7	nsv1067555	chr17:15804228-16001117	Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
8	nsv1063459	chr17:15804228-16543593	Weak transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
9	nsv907707	chr17:15846535-15950751	Strong transcription Weak transcription Active TSS ZNF genes & repeats Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
10	nsv907709	chr17:15851196-15937487	Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
11	nsv907708	chr17:15851196-15950751	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
12	nsv1057493	chr17:15852125-15930718	Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
13	nsv543215	chr17:15852125-15930718	Enhancers Bivalent Enhancer Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
14	nsv907710	chr17:15854257-15950751	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
15	nsv1062220	chr17:15869557-16093156	Genic enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
16	nsv1064878	chr17:15869557-16097241	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
17	nsv1055173	chr17:15875935-16097241	Flanking Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
18	nsv1056157	chr17:15890584-16088473	Strong transcription Genic enhancers Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases

mRNA abundance (count:15)

SNP	Gene	Cis/trans	Tissue	Source
rs3760298	NCOR1	Cis_1M	lymphoblastoid	RTeQTL
rs3760298	ADORA2B	cis	Thyroid	GTEx
rs3760298	ENSG00000011295	cis	multi-tissue	Pritchard
rs3760298	ADORA2B	cis	Muscle Skeletal	GTEx
rs3760298	ADORA2B	cis	Artery Tibial	GTEx
rs3760298	ADORA2B	cis	Adipose Subcutaneous	GTEx
rs3760298	TTC19	Cis_1M	lymphoblastoid	RTeQTL
rs3760298	ADORA2B	cis	Esophagus Muscularis	GTEx
rs3760298	ZSWIM7	cis	Muscle Skeletal	GTEx
rs3760298	ZSWIM7	Cis_1M	lymphoblastoid	RTeQTL
rs3760298	CENPV	cis	Artery Tibial	GTEx
rs3760298	NCOR1	cis	parietal	SCAN
rs3760298	TTC19	cis	lymphoblastoid	seeQTL
rs3760298	CENPV	cis	parietal	SCAN
rs3760298	ADORA2B	cis	Nerve Tibial	GTEx

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:15903800-15905600	Enhancers	Spleen	Spleen
2	chr17:15903800-15907000	Weak transcription	Aorta	Aorta
3	chr17:15904000-15905200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr17:15904000-15905200	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr17:15904000-15910800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr17:15904200-15905200	Transcr. at gene 5' and 3'	Breast Myoepithelial Primary Cells	Breast
7	chr17:15904200-15905200	Genic enhancers	Primary B cells from peripheral blood	blood
8	chr17:15904200-15905200	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr17:15904200-15905200	Transcr. at gene 5' and 3'	NHEK	skin
10	chr17:15904200-15905400	Transcr. at gene 5' and 3'	Dnd41	blood
11	chr17:15904200-15907400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr17:15904400-15905200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr17:15904400-15905200	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
14	chr17:15904400-15905200	Transcr. at gene 5' and 3'	Brain Dorsolateral Prefrontal Cortex	brain
15	chr17:15904400-15905400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr17:15904400-15905800	Genic enhancers	Primary T cells fromperipheralblood	blood
17	chr17:15904400-15906000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr17:15904400-15906400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr17:15904400-15906600	Genic enhancers	Left Ventricle	heart
20	chr17:15904400-15912600	Strong transcription	Fetal Muscle Trunk	muscle
21	chr17:15904600-15905200	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
22	chr17:15904600-15905200	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
23	chr17:15904600-15905200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
24	chr17:15904600-15905200	Genic enhancers	Primary T helper cells fromperipheralblood	blood
25	chr17:15904600-15905200	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
26	chr17:15904600-15905200	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr17:15904600-15905200	Weak transcription	Esophagus	oesophagus
28	chr17:15904600-15905200	Genic enhancers	Placenta	Placenta
29	chr17:15904600-15905200	Weak transcription	Lung	lung
30	chr17:15904600-15905200	Transcr. at gene 5' and 3'	Rectal Smooth Muscle	rectum
31	chr17:15904600-15905200	Enhancers	Thymus	Thymus
32	chr17:15904600-15905200	Transcr. at gene 5' and 3'	HMEC	breast
33	chr17:15904600-15905400	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr17:15904600-15905400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
35	chr17:15904600-15905400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
36	chr17:15904600-15905400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
37	chr17:15904600-15905400	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr17:15904600-15905400	Genic enhancers	Brain Cingulate Gyrus	brain
39	chr17:15904600-15905400	Transcr. at gene 5' and 3'	Brain Hippocampus Middle	brain
40	chr17:15904600-15905600	ZNF genes & repeats	Primary hematopoietic stem cells	blood
41	chr17:15904600-15906600	ZNF genes & repeats	A549	lung
42	chr17:15904600-15912200	Strong transcription	Primary B cells from cord blood	blood
43	chr17:15904600-15912600	Strong transcription	H9 Cell Line	embryonic stem cell
44	chr17:15904600-15913400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr17:15904800-15905200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
46	chr17:15904800-15905200	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr17:15904800-15905200	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
48	chr17:15904800-15905200	Genic enhancers	Primary T helper 17 cells PMA-I stimulated	--
49	chr17:15904800-15905200	Genic enhancers	Primary T killer memory cells from peripheral blood	blood
50	chr17:15904800-15905200	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain

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