Variant report

Variant rs9909697
Chromosome Location chr17:16019978-16019979
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15995400-16021400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr17:15999400-16052400 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr17:15999800-16047600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr17:16005000-16038600 Weak transcription Stomach Mucosa stomach
5 chr17:16006600-16064200 Strong transcription Rectal Mucosa Donor 29 rectum
6 chr17:16011000-16022200 Weak transcription Colon Smooth Muscle Colon
7 chr17:16014400-16029800 Strong transcription Sigmoid Colon Sigmoid Colon
8 chr17:16014600-16028600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr17:16015400-16030400 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr17:16015400-16031800 Strong transcription Fetal Intestine Large intestine
11 chr17:16015600-16077600 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr17:16015800-16024600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr17:16015800-16029600 Strong transcription Fetal Thymus thymus
14 chr17:16015800-16064400 Strong transcription Primary T cells fromperipheralblood blood
15 chr17:16016000-16026600 Strong transcription Fetal Muscle Trunk muscle
16 chr17:16016400-16022200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr17:16016400-16029800 Strong transcription Primary T helper naive cells fromperipheralblood blood
18 chr17:16016400-16064200 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr17:16016600-16020800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr17:16016600-16024400 Strong transcription Skeletal Muscle Female skeletal muscle
21 chr17:16016800-16025200 Strong transcription Primary T helper naive cells from peripheral blood blood
22 chr17:16016800-16048800 Strong transcription Adipose Nuclei Adipose
23 chr17:16017000-16039600 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr17:16017200-16025800 Strong transcription Fetal Kidney kidney
25 chr17:16017200-16030400 Strong transcription Osteobl bone
26 chr17:16017200-16064200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr17:16017400-16020400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
28 chr17:16017400-16021600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr17:16017400-16022400 Strong transcription Primary T killer naive cells fromperipheralblood blood
30 chr17:16017400-16023200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr17:16017400-16024600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr17:16017400-16025000 Strong transcription Muscle Satellite Cultured Cells --
33 chr17:16017600-16020000 Strong transcription Brain Substantia Nigra brain
34 chr17:16017600-16020200 ZNF genes & repeats H1 Cell Line embryonic stem cell
35 chr17:16017600-16020200 Strong transcription Colonic Mucosa Colon
36 chr17:16017600-16020400 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
37 chr17:16017600-16020400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
38 chr17:16017600-16020800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
39 chr17:16017600-16021400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr17:16017600-16022400 Strong transcription Primary T killer memory cells from peripheral blood blood
41 chr17:16017600-16024600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr17:16017600-16026400 Strong transcription Left Ventricle heart
43 chr17:16017600-16028000 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr17:16017600-16036000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr17:16017800-16020000 ZNF genes & repeats Fetal Muscle Leg muscle
46 chr17:16017800-16020200 Strong transcription Placenta Amnion Placenta Amnion
47 chr17:16017800-16020400 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
48 chr17:16017800-16020600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
49 chr17:16017800-16020600 Strong transcription Stomach Smooth Muscle stomach
50 chr17:16017800-16020800 ZNF genes & repeats GM12878-XiMat blood

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