Variant report

Variant rs178820
Chromosome Location chr17:16090785-16090786
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16035800-16103400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr17:16039200-16096800 Weak transcription K562 blood
3 chr17:16042000-16094200 Weak transcription Psoas Muscle Psoas
4 chr17:16049200-16093200 Weak transcription Aorta Aorta
5 chr17:16049200-16103400 Weak transcription Spleen Spleen
6 chr17:16049200-16108600 Weak transcription Esophagus oesophagus
7 chr17:16052200-16100400 Weak transcription Ovary ovary
8 chr17:16055200-16102600 Weak transcription Brain Angular Gyrus brain
9 chr17:16055400-16094000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr17:16055400-16104000 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr17:16055800-16102000 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr17:16059400-16094200 Weak transcription Rectal Smooth Muscle rectum
13 chr17:16059400-16102400 Weak transcription Small Intestine intestine
14 chr17:16059400-16102400 Weak transcription NHLF lung
15 chr17:16059400-16102800 Weak transcription Pancreas Pancrea
16 chr17:16059800-16093200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr17:16062200-16093200 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr17:16064000-16101000 Weak transcription Lung lung
19 chr17:16064600-16106000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr17:16067400-16094000 Weak transcription Brain Anterior Caudate brain
21 chr17:16069000-16093800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr17:16075400-16092800 Weak transcription NHEK skin
23 chr17:16075400-16093400 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr17:16075400-16094000 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr17:16075400-16096800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr17:16075600-16093400 Weak transcription Brain Substantia Nigra brain
27 chr17:16082000-16094000 Weak transcription Fetal Heart heart
28 chr17:16083200-16091200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr17:16083600-16097000 Weak transcription Brain Hippocampus Middle brain
30 chr17:16084000-16094200 Weak transcription Gastric stomach
31 chr17:16084200-16092000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr17:16084800-16098000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr17:16086000-16098000 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr17:16086400-16090800 Strong transcription iPS-20b Cell Line embryonic stem cell
35 chr17:16086600-16101600 Strong transcription Primary monocytes fromperipheralblood blood
36 chr17:16086600-16102400 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr17:16086800-16091200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr17:16086800-16102200 Weak transcription Stomach Mucosa stomach
39 chr17:16087000-16090800 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr17:16087000-16091400 Strong transcription Primary hematopoietic stem cells blood
41 chr17:16087200-16090800 Strong transcription Primary B cells from cord blood blood
42 chr17:16087200-16091000 Strong transcription Primary B cells from peripheral blood blood
43 chr17:16087200-16091400 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr17:16087200-16097600 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr17:16087200-16098000 Strong transcription Fetal Intestine Large intestine
46 chr17:16087200-16108200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr17:16087400-16091000 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr17:16087400-16097400 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr17:16087600-16090800 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr17:16087800-16091600 Strong transcription Fetal Thymus thymus

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