The 2.0 version of rSNPBase

Variant report

Variant rs3786556
Chromosome Location chr19:41744831-41744832
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41730200-41762600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:41732600-41768800 Weak transcription Small Intestine intestine
3 chr19:41732800-41745200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr19:41733000-41745200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:41733200-41745400 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr19:41733200-41746000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr19:41733200-41749400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr19:41733200-41767200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr19:41733200-41767200 Strong transcription Muscle Satellite Cultured Cells --
10 chr19:41734000-41748600 Weak transcription Hela-S3 cervix
11 chr19:41736000-41752400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr19:41736000-41767200 Strong transcription Osteobl bone
13 chr19:41736000-41767400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr19:41736200-41745200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr19:41736200-41757000 Strong transcription NH-A brain
16 chr19:41736400-41767800 Strong transcription Placenta Amnion Placenta Amnion
17 chr19:41736600-41745600 Weak transcription Fetal Kidney kidney
18 chr19:41736600-41757200 Strong transcription NHLF lung
19 chr19:41736600-41766200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr19:41736600-41766600 Strong transcription Fetal Stomach stomach
21 chr19:41736600-41767000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr19:41736600-41767200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr19:41736600-41767400 Strong transcription HSMM muscle
24 chr19:41736600-41767800 Weak transcription Brain Angular Gyrus brain
25 chr19:41736800-41754400 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr19:41736800-41758200 Strong transcription Fetal Muscle Leg muscle
27 chr19:41736800-41762400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr19:41737200-41746200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr19:41737200-41766000 Strong transcription Stomach Smooth Muscle stomach
30 chr19:41737400-41766600 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr19:41738000-41761000 Strong transcription Colon Smooth Muscle Colon
32 chr19:41738200-41745000 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr19:41738200-41745600 Weak transcription Brain Substantia Nigra brain
34 chr19:41738600-41748600 Weak transcription Brain Cingulate Gyrus brain
35 chr19:41738800-41767400 Weak transcription Fetal Brain Male brain
36 chr19:41739000-41748600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr19:41739400-41745000 Strong transcription ES-I3 Cell Line embryonic stem cell
38 chr19:41739400-41752800 Strong transcription NHDF-Ad bronchial
39 chr19:41739400-41754200 Weak transcription Left Ventricle heart
40 chr19:41739400-41758200 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr19:41739400-41767400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr19:41739600-41749600 Strong transcription Aorta Aorta
43 chr19:41739600-41752000 Strong transcription Adipose Nuclei Adipose
44 chr19:41739800-41766200 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr19:41740200-41754400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr19:41740800-41745000 Weak transcription Fetal Lung lung
47 chr19:41741000-41745600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr19:41741000-41747800 Weak transcription Brain Hippocampus Middle brain
49 chr19:41742600-41749600 Strong transcription Rectal Smooth Muscle rectum
50 chr19:41742600-41752200 Strong transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015