Variant report

Variant rs3788351
Chromosome Location chr22:23469181-23469182
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23439000-23470400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:23441800-23470600 Weak transcription Colon Smooth Muscle Colon
3 chr22:23442600-23470600 Weak transcription Pancreas Pancrea
4 chr22:23453200-23484800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr22:23455200-23470400 Weak transcription Fetal Intestine Small intestine
6 chr22:23456200-23470000 Weak transcription Left Ventricle heart
7 chr22:23456200-23472400 Strong transcription Right Atrium heart
8 chr22:23457600-23470200 Weak transcription HSMM muscle
9 chr22:23457600-23470400 Weak transcription HSMMtube muscle
10 chr22:23460800-23470400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr22:23461200-23469400 Weak transcription Fetal Brain Male brain
12 chr22:23462200-23470800 Weak transcription Primary B cells from cord blood blood
13 chr22:23462400-23470400 Weak transcription Primary B cells from peripheral blood blood
14 chr22:23462800-23470400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr22:23464600-23469200 Strong transcription Brain Germinal Matrix brain
16 chr22:23465600-23469200 Weak transcription Brain Substantia Nigra brain
17 chr22:23466000-23470400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr22:23466200-23469400 Weak transcription Brain Hippocampus Middle brain
19 chr22:23466200-23470400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr22:23466200-23470400 Weak transcription HepG2 liver
21 chr22:23467000-23470400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr22:23467200-23469200 Weak transcription Brain Cingulate Gyrus brain
23 chr22:23467200-23470000 Weak transcription Adipose Nuclei Adipose
24 chr22:23467200-23470400 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr22:23467400-23470400 Weak transcription Fetal Stomach stomach
26 chr22:23467800-23469800 Weak transcription Stomach Smooth Muscle stomach
27 chr22:23467800-23471600 Enhancers Brain Inferior Temporal Lobe brain
28 chr22:23468000-23469200 Enhancers Brain Angular Gyrus brain
29 chr22:23468000-23470000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr22:23468000-23470000 Weak transcription Brain Anterior Caudate brain
31 chr22:23468200-23470000 Weak transcription Ovary ovary
32 chr22:23468600-23469200 Enhancers Gastric stomach
33 chr22:23468800-23469200 Weak transcription Fetal Brain Female brain
34 chr22:23469000-23469200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr22:23469000-23469600 Enhancers Brain Dorsolateral Prefrontal Cortex brain

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