Variant report

Variant rs5759594
Chromosome Location chr22:23470660-23470661
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23453200-23484800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:23456200-23472400 Strong transcription Right Atrium heart
3 chr22:23462200-23470800 Weak transcription Primary B cells from cord blood blood
4 chr22:23467800-23471600 Enhancers Brain Inferior Temporal Lobe brain
5 chr22:23469200-23471400 Enhancers Brain Cingulate Gyrus brain
6 chr22:23469200-23471600 Enhancers Brain Substantia Nigra brain
7 chr22:23469400-23471600 Enhancers Brain Hippocampus Middle brain
8 chr22:23469400-23471600 Bivalent Enhancer Fetal Muscle Trunk muscle
9 chr22:23469400-23471800 Enhancers Fetal Brain Male brain
10 chr22:23469600-23471200 Enhancers Brain Angular Gyrus brain
11 chr22:23469800-23471200 Enhancers Stomach Smooth Muscle stomach
12 chr22:23470000-23470800 Enhancers Left Ventricle heart
13 chr22:23470000-23471200 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr22:23470000-23471200 Enhancers Adipose Nuclei Adipose
15 chr22:23470000-23471200 Enhancers Ovary ovary
16 chr22:23470000-23471400 Enhancers Brain Anterior Caudate brain
17 chr22:23470000-23471400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
18 chr22:23470000-23471400 Enhancers Fetal Muscle Leg muscle
19 chr22:23470200-23470800 Enhancers Placenta Placenta
20 chr22:23470200-23471000 Enhancers HSMM muscle
21 chr22:23470200-23471400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr22:23470200-23471400 Enhancers Fetal Brain Female brain
23 chr22:23470400-23470800 Enhancers H1 Cell Line embryonic stem cell
24 chr22:23470400-23470800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr22:23470400-23470800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr22:23470400-23470800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr22:23470400-23470800 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr22:23470400-23470800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr22:23470400-23470800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
30 chr22:23470400-23470800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
31 chr22:23470400-23470800 Enhancers Duodenum Smooth Muscle Duodenum
32 chr22:23470400-23470800 Enhancers Fetal Intestine Small intestine
33 chr22:23470400-23470800 Enhancers Skeletal Muscle Female skeletal muscle
34 chr22:23470400-23471000 Enhancers Primary B cells from peripheral blood blood
35 chr22:23470400-23471000 Enhancers Cortex derived primary cultured neurospheres brain
36 chr22:23470400-23471000 Enhancers Brain Germinal Matrix brain
37 chr22:23470400-23471000 Enhancers Fetal Lung lung
38 chr22:23470400-23471000 Enhancers Fetal Stomach stomach
39 chr22:23470400-23471000 Enhancers Skeletal Muscle Male skeletal muscle
40 chr22:23470400-23471000 Enhancers Stomach Mucosa stomach
41 chr22:23470400-23471000 Enhancers HepG2 liver
42 chr22:23470400-23471200 Enhancers Fetal Heart heart
43 chr22:23470400-23471400 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr22:23470400-23471600 Bivalent Enhancer Primary T cells fromperipheralblood blood
45 chr22:23470600-23470800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr22:23470600-23470800 Enhancers Colon Smooth Muscle Colon
47 chr22:23470600-23471000 Enhancers Primary T helper cells PMA-I stimulated --
48 chr22:23470600-23471000 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr22:23470600-23471000 Enhancers Colonic Mucosa Colon
50 chr22:23470600-23471000 Enhancers Fetal Thymus thymus

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