Variant report

Variant rs2267001
Chromosome Location chr22:23456696-23456697
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23437600-23458000 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr22:23438600-23461800 Enhancers Brain Substantia Nigra brain
3 chr22:23439000-23470400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr22:23439800-23462000 Enhancers Brain Angular Gyrus brain
5 chr22:23441800-23460000 Weak transcription Fetal Brain Male brain
6 chr22:23441800-23470600 Weak transcription Colon Smooth Muscle Colon
7 chr22:23442600-23470600 Weak transcription Pancreas Pancrea
8 chr22:23444200-23461800 Enhancers Brain Hippocampus Middle brain
9 chr22:23447400-23465200 Bivalent Enhancer Fetal Muscle Trunk muscle
10 chr22:23448400-23457600 Enhancers HSMMtube muscle
11 chr22:23449200-23457000 Weak transcription HepG2 liver
12 chr22:23451800-23461400 Weak transcription Primary B cells from peripheral blood blood
13 chr22:23452200-23457000 Enhancers Brain Anterior Caudate brain
14 chr22:23452200-23458200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr22:23452800-23462000 Enhancers Brain Inferior Temporal Lobe brain
16 chr22:23453200-23461800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr22:23453200-23484800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr22:23453400-23465400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr22:23453600-23457600 Enhancers HSMM muscle
20 chr22:23453800-23466800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr22:23454000-23458200 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr22:23454200-23456800 Enhancers Placenta Placenta
23 chr22:23454600-23456800 Enhancers Right Ventricle heart
24 chr22:23454800-23456800 Bivalent Enhancer Adipose Nuclei Adipose
25 chr22:23455000-23457200 Bivalent Enhancer Muscle Satellite Cultured Cells --
26 chr22:23455200-23457200 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr22:23455200-23470400 Weak transcription Fetal Intestine Small intestine
28 chr22:23455400-23459400 Weak transcription Brain Germinal Matrix brain
29 chr22:23455800-23456800 Weak transcription Fetal Brain Female brain
30 chr22:23455800-23457000 Weak transcription Dnd41 blood
31 chr22:23456000-23456800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
32 chr22:23456000-23458000 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr22:23456000-23458000 Weak transcription Fetal Thymus thymus
34 chr22:23456000-23458200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr22:23456000-23460200 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr22:23456000-23465400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr22:23456200-23457000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
38 chr22:23456200-23458800 Enhancers Fetal Muscle Leg muscle
39 chr22:23456200-23460000 Weak transcription Stomach Smooth Muscle stomach
40 chr22:23456200-23460800 Weak transcription Spleen Spleen
41 chr22:23456200-23465200 Weak transcription Ovary ovary
42 chr22:23456200-23470000 Weak transcription Left Ventricle heart
43 chr22:23456200-23472400 Strong transcription Right Atrium heart
44 chr22:23456400-23456800 Genic enhancers Fetal Stomach stomach
45 chr22:23456600-23456800 Flanking Active TSS Brain Cingulate Gyrus brain
46 chr22:23456600-23456800 Enhancers Gastric stomach
47 chr22:23456600-23457000 Enhancers Fetal Heart heart
48 chr22:23456600-23457200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin

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