Variant report

Variant rs3788346
Chromosome Location chr22:23431090-23431091
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23413600-23440600 Strong transcription Right Atrium heart
2 chr22:23416000-23452800 Weak transcription Placenta Amnion Placenta Amnion
3 chr22:23416800-23435000 Weak transcription Fetal Brain Male brain
4 chr22:23420600-23435000 Weak transcription Brain Germinal Matrix brain
5 chr22:23420800-23437000 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr22:23425800-23433000 Weak transcription Fetal Brain Female brain
7 chr22:23426400-23437800 Enhancers Brain Inferior Temporal Lobe brain
8 chr22:23427400-23437000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr22:23427800-23447600 Weak transcription Fetal Intestine Small intestine
10 chr22:23428000-23433400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr22:23428600-23431200 Enhancers Primary B cells from cord blood blood
12 chr22:23428600-23431400 Enhancers Primary B cells from peripheral blood blood
13 chr22:23428600-23431600 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr22:23428800-23436600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr22:23429600-23431600 Bivalent Enhancer K562 blood
16 chr22:23429600-23432200 Enhancers Brain Cingulate Gyrus brain
17 chr22:23430200-23431200 Enhancers H1 Cell Line embryonic stem cell
18 chr22:23430200-23431200 Enhancers HUES64 Cell Line embryonic stem cell
19 chr22:23430200-23431200 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr22:23430200-23431200 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr22:23430200-23431600 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr22:23430200-23431600 Enhancers HUES6 Cell Line embryonic stem cell
23 chr22:23430200-23438000 Enhancers Brain Substantia Nigra brain
24 chr22:23430400-23431200 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr22:23430400-23431200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr22:23430400-23431200 Enhancers H9 Cell Line embryonic stem cell
27 chr22:23430400-23431200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr22:23430400-23431200 Enhancers Primary T cells fromperipheralblood blood
29 chr22:23430400-23431200 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr22:23430400-23431400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr22:23430400-23431400 Enhancers Brain Anterior Caudate brain
32 chr22:23430400-23431600 Enhancers Esophagus oesophagus
33 chr22:23430400-23431600 Enhancers Pancreas Pancrea
34 chr22:23430400-23431600 Enhancers Spleen Spleen
35 chr22:23430400-23432000 Enhancers Right Ventricle heart
36 chr22:23430400-23432000 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
37 chr22:23430400-23432200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr22:23430400-23433000 Enhancers Gastric stomach
39 chr22:23430600-23432000 Weak transcription Brain Angular Gyrus brain
40 chr22:23430600-23432000 Enhancers Ovary ovary
41 chr22:23430600-23432800 Enhancers Adipose Nuclei Adipose
42 chr22:23430600-23437000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr22:23430600-23448600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr22:23430800-23432400 Weak transcription Brain Hippocampus Middle brain
45 chr22:23430800-23433000 Weak transcription Stomach Smooth Muscle stomach
46 chr22:23431000-23431400 Enhancers Pancreatic Islets Pancreatic Islet
47 chr22:23431000-23431600 Enhancers Hela-S3 cervix
48 chr22:23431000-23432000 Weak transcription Stomach Mucosa stomach
49 chr22:23431000-23433400 Weak transcription HepG2 liver
50 chr22:23431000-23444400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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