Variant report
Variant | rs2330361 |
---|---|
Chromosome Location | chr22:23512619-23512620 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23512505..23515264-chr9:134006049..134008480,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000126883 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs1051875 | 0.90[JPT][hapmap] |
rs10775764 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs11704365 | 0.85[JPT][hapmap] |
rs12167308 | 0.95[CHB][hapmap];1.00[JPT][hapmap] |
rs12484280 | 0.87[ASN][1000 genomes] |
rs13054985 | 0.89[JPT][hapmap] |
rs1805058 | 0.89[JPT][hapmap] |
rs1807460 | 0.96[CEU][hapmap];0.90[CHB][hapmap];0.81[JPT][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1807702 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1807705 | 0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1807706 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1989776 | 0.84[JPT][hapmap] |
rs1989777 | 0.84[JPT][hapmap] |
rs1989778 | 0.84[JPT][hapmap] |
rs2008176 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2071431 | 0.95[JPT][hapmap];0.87[ASN][1000 genomes] |
rs2071432 | 0.87[ASN][1000 genomes] |
rs2071433 | 0.87[ASN][1000 genomes] |
rs2071434 | 0.84[ASN][1000 genomes] |
rs2071435 | 0.85[ASN][1000 genomes] |
rs2071436 | 0.87[ASN][1000 genomes] |
rs2106109 | 0.86[ASN][1000 genomes] |
rs2157710 | 0.90[JPT][hapmap] |
rs2246716 | 1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2249692 | 0.81[CHB][hapmap];0.90[JPT][hapmap];0.85[ASN][1000 genomes] |
rs2266995 | 0.84[JPT][hapmap] |
rs2266997 | 0.84[JPT][hapmap] |
rs2267000 | 0.85[JPT][hapmap] |
rs2267001 | 0.85[JPT][hapmap] |
rs2267003 | 0.85[JPT][hapmap] |
rs2267004 | 0.90[JPT][hapmap] |
rs2267005 | 0.85[JPT][hapmap] |
rs2267006 | 0.90[JPT][hapmap] |
rs2267007 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2267008 | 0.87[ASN][1000 genomes] |
rs2267009 | 0.95[JPT][hapmap];0.87[ASN][1000 genomes] |
rs2267010 | 0.81[JPT][hapmap] |
rs2267011 | 0.90[JPT][hapmap];0.87[ASN][1000 genomes] |
rs2283802 | 0.89[JPT][hapmap] |
rs2283803 | 0.90[JPT][hapmap] |
rs2283804 | 0.90[JPT][hapmap] |
rs2301554 | 0.90[JPT][hapmap] |
rs2301555 | 1.00[CHB][hapmap];0.83[ASN][1000 genomes] |
rs2330336 | 0.89[JPT][hapmap] |
rs3761418 | 0.90[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes] |
rs3788342 | 0.84[JPT][hapmap] |
rs3788343 | 0.84[JPT][hapmap] |
rs3788346 | 0.84[JPT][hapmap] |
rs3788347 | 0.90[JPT][hapmap] |
rs3788348 | 0.90[JPT][hapmap] |
rs3788350 | 0.84[JPT][hapmap] |
rs3788356 | 0.87[ASN][1000 genomes] |
rs3788357 | 0.88[ASN][1000 genomes] |
rs3810614 | 0.84[JPT][hapmap] |
rs3827315 | 0.84[JPT][hapmap] |
rs4552283 | 0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4820536 | 0.84[JPT][hapmap] |
rs4820537 | 0.90[JPT][hapmap] |
rs4820539 | 0.90[JPT][hapmap] |
rs4820541 | 0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes] |
rs4820542 | 0.95[JPT][hapmap];0.87[ASN][1000 genomes] |
rs4822354 | 0.84[JPT][hapmap] |
rs4822357 | 0.90[JPT][hapmap] |
rs4822359 | 0.90[JPT][hapmap] |
rs4822360 | 0.90[JPT][hapmap] |
rs4822361 | 0.90[JPT][hapmap] |
rs4822362 | 0.90[JPT][hapmap] |
rs4822369 | 0.91[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs55637879 | 0.93[ASN][1000 genomes] |
rs5751576 | 0.84[JPT][hapmap] |
rs5751578 | 0.83[JPT][hapmap] |
rs5751587 | 0.88[JPT][hapmap] |
rs5751589 | 0.90[JPT][hapmap] |
rs5751593 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5751596 | 0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5751597 | 0.93[ASN][1000 genomes] |
rs5751598 | 0.93[ASN][1000 genomes] |
rs5751600 | 0.91[ASN][1000 genomes] |
rs5751601 | 0.91[ASN][1000 genomes] |
rs5751602 | 0.88[ASN][1000 genomes] |
rs5751603 | 0.80[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes] |
rs5751606 | 0.90[JPT][hapmap];0.87[ASN][1000 genomes] |
rs5751607 | 0.87[ASN][1000 genomes] |
rs5759593 | 0.90[JPT][hapmap] |
rs5759598 | 0.90[JPT][hapmap] |
rs5759600 | 0.90[JPT][hapmap] |
rs5759603 | 0.90[JPT][hapmap] |
rs5759604 | 0.87[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes] |
rs5759607 | 0.86[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes] |
rs5759608 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759609 | 0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759611 | 0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes] |
rs5759612 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759613 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759614 | 0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759615 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759616 | 0.91[ASN][1000 genomes] |
rs5759617 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759618 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759619 | 0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs5759620 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759621 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs5759622 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs5759623 | 0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs5759624 | 0.93[ASN][1000 genomes] |
rs5759628 | 0.90[ASN][1000 genomes] |
rs5759629 | 0.91[ASN][1000 genomes] |
rs5759630 | 0.91[ASN][1000 genomes] |
rs5759631 | 0.90[CHB][hapmap];0.95[JPT][hapmap];0.91[ASN][1000 genomes] |
rs5759635 | 0.87[ASN][1000 genomes] |
rs5759637 | 0.87[ASN][1000 genomes] |
rs5759638 | 0.85[ASN][1000 genomes] |
rs57983679 | 0.94[ASN][1000 genomes] |
rs5996483 | 0.90[JPT][hapmap];0.87[ASN][1000 genomes] |
rs6003502 | 0.89[JPT][hapmap] |
rs6003518 | 0.90[JPT][hapmap] |
rs60037456 | 0.93[ASN][1000 genomes] |
rs6519421 | 0.91[ASN][1000 genomes] |
rs713617 | 0.90[JPT][hapmap];0.87[ASN][1000 genomes] |
rs713682 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs7289172 | 0.91[ASN][1000 genomes] |
rs73152631 | 0.86[ASN][1000 genomes] |
rs737818 | 0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs737819 | 0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs737820 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs739362 | 0.89[JPT][hapmap] |
rs756631 | 0.85[JPT][hapmap] |
rs756633 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs768513 | 0.85[JPT][hapmap] |
rs768514 | 0.93[ASN][1000 genomes] |
rs8138361 | 0.84[ASN][1000 genomes] |
rs8142746 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs874138 | 0.89[JPT][hapmap] |
rs885962 | 0.84[JPT][hapmap] |
rs885963 | 0.85[JPT][hapmap] |
rs885964 | 0.90[JPT][hapmap] |
rs885965 | 0.81[JPT][hapmap] |
rs916583 | 0.90[JPT][hapmap] |
rs916584 | 0.90[JPT][hapmap] |
rs916585 | 0.87[JPT][hapmap] |
rs9608085 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs9612234 | 0.90[JPT][hapmap] |
rs9612237 | 0.89[JPT][hapmap] |
rs9612244 | 0.85[ASN][1000 genomes] |
rs9612248 | 0.85[JPT][hapmap] |
rs9612251 | 0.88[ASN][1000 genomes] |
rs9612252 | 0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs9612253 | 0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs9612257 | 0.90[JPT][hapmap];0.80[ASN][1000 genomes] |
rs9624047 | 0.87[ASN][1000 genomes] |
rs9624048 | 0.87[ASN][1000 genomes] |
rs9624049 | 0.85[ASN][1000 genomes] |
rs9624050 | 0.84[ASN][1000 genomes] |
rs9624051 | 0.86[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv915235 | chr22:22971768-23650987 | Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 101 gene(s) | inside rSNPs | diseases |
2 | esv3388845 | chr22:22973346-23652447 | Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 100 gene(s) | inside rSNPs | diseases |
3 | nsv531799 | chr22:22993679-23642142 | Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
4 | nsv1061433 | chr22:22997799-23649107 | Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
5 | nsv521695 | chr22:22998337-23648009 | Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
6 | nsv915236 | chr22:22998337-23650987 | Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
7 | nsv588512 | chr22:22998337-23667731 | Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 99 gene(s) | inside rSNPs | diseases |
8 | nsv531800 | chr22:23002708-23648163 | Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
9 | nsv916593 | chr22:23002709-23648790 | Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
10 | nsv993496 | chr22:23002709-23654222 | Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
11 | nsv1067002 | chr22:23007167-23643363 | Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
12 | nsv1067324 | chr22:23007367-23654223 | Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
13 | nsv533839 | chr22:23012013-23643223 | Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
14 | nsv916933 | chr22:23012069-23654237 | Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 97 gene(s) | inside rSNPs | diseases |
15 | nsv531801 | chr22:23028586-23657804 | Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 92 gene(s) | inside rSNPs | diseases |
16 | nsv531802 | chr22:23046186-23627391 | Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 85 gene(s) | inside rSNPs | diseases |
17 | nsv1060509 | chr22:23055148-23648719 | Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 83 gene(s) | inside rSNPs | diseases |
18 | nsv1056324 | chr22:23055148-23750989 | Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 88 gene(s) | inside rSNPs | diseases |
19 | nsv1062780 | chr22:23060449-23648719 | Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 82 gene(s) | inside rSNPs | diseases |
20 | nsv948942 | chr22:23063178-23645718 | Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 82 gene(s) | inside rSNPs | diseases |
21 | nsv1063200 | chr22:23097177-23643224 | Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 80 gene(s) | inside rSNPs | diseases |
22 | nsv949250 | chr22:23157485-23645718 | Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 69 gene(s) | inside rSNPs | diseases |
23 | nsv1057659 | chr22:23400739-24138788 | Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 85 gene(s) | inside rSNPs | diseases |
24 | nsv1058604 | chr22:23497533-23545751 | Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:23490400-23522000 | Weak transcription | Aorta | Aorta |
2 | chr22:23492400-23518000 | Weak transcription | Esophagus | oesophagus |
3 | chr22:23504800-23516200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
4 | chr22:23506800-23520600 | Weak transcription | Brain Anterior Caudate | brain |
5 | chr22:23509400-23518000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
6 | chr22:23509600-23516200 | Weak transcription | HepG2 | liver |
7 | chr22:23509800-23518200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
8 | chr22:23510200-23516400 | Weak transcription | H1 Cell Line | embryonic stem cell |
9 | chr22:23511000-23517800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
10 | chr22:23511000-23517800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
11 | chr22:23511000-23520800 | Weak transcription | Gastric | stomach |
12 | chr22:23511600-23517600 | Weak transcription | Fetal Stomach | stomach |
13 | chr22:23512400-23513600 | Strong transcription | Right Atrium | heart |