The 2.0 version of rSNPBase

Variant report

Variant rs9624048
Chromosome Location chr22:23537160-23537161
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23526000-23546000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr22:23526200-23546800 Weak transcription Colonic Mucosa Colon
3 chr22:23526400-23560800 Weak transcription A549 lung
4 chr22:23527000-23541400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr22:23527000-23547200 Weak transcription Fetal Kidney kidney
6 chr22:23527200-23545400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr22:23527200-23547000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr22:23527400-23545400 Weak transcription Duodenum Mucosa Duodenum
9 chr22:23527600-23541200 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr22:23527600-23544200 Strong transcription Fetal Intestine Small intestine
11 chr22:23528400-23540600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr22:23529000-23542400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr22:23529600-23552800 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr22:23530200-23545200 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr22:23530400-23545600 Weak transcription Liver Liver
16 chr22:23530400-23558800 Weak transcription Small Intestine intestine
17 chr22:23530600-23545400 Weak transcription Colon Smooth Muscle Colon
18 chr22:23530600-23557200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr22:23530800-23539800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr22:23530800-23540000 Weak transcription Ovary ovary
21 chr22:23530800-23540600 Weak transcription NH-A brain
22 chr22:23530800-23540800 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr22:23530800-23545200 Weak transcription Rectal Smooth Muscle rectum
24 chr22:23530800-23545200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr22:23530800-23545600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr22:23531000-23538400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr22:23533000-23539000 Weak transcription Fetal Intestine Large intestine
28 chr22:23533800-23540400 Weak transcription HUVEC blood vessel
29 chr22:23534000-23545400 Weak transcription Primary B cells from peripheral blood blood
30 chr22:23534200-23538400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr22:23534400-23537600 Enhancers Adipose Nuclei Adipose
32 chr22:23534600-23537200 Enhancers Placenta Placenta
33 chr22:23534600-23538200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr22:23534800-23541000 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr22:23534800-23541200 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr22:23534800-23541200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr22:23534800-23541400 Weak transcription H9 Cell Line embryonic stem cell
38 chr22:23535000-23539600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr22:23535000-23540400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr22:23535000-23541800 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr22:23535000-23556000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr22:23535200-23538200 Weak transcription Brain Germinal Matrix brain
43 chr22:23535200-23538200 Weak transcription Fetal Brain Female brain
44 chr22:23535200-23538400 Weak transcription H1 Cell Line embryonic stem cell
45 chr22:23535200-23538400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr22:23535200-23539800 Weak transcription Spleen Spleen
47 chr22:23535200-23540800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr22:23535200-23541200 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr22:23535400-23543000 Weak transcription Stomach Mucosa stomach
50 chr22:23535600-23538400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015