Variant report

Variant rs5996470
Chromosome Location chr22:23483255-23483256
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23453200-23484800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:23470800-23483600 Weak transcription Fetal Intestine Small intestine
3 chr22:23471400-23483600 Weak transcription Brain Anterior Caudate brain
4 chr22:23471400-23483600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr22:23476200-23483800 Enhancers Primary T cells fromperipheralblood blood
6 chr22:23476600-23483600 Weak transcription Fetal Stomach stomach
7 chr22:23476800-23483800 Weak transcription Right Ventricle heart
8 chr22:23477000-23483800 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr22:23477800-23483600 Enhancers Primary T helper cells PMA-I stimulated --
10 chr22:23477800-23484200 Enhancers Primary B cells from cord blood blood
11 chr22:23477800-23485000 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr22:23478000-23484000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr22:23478200-23483600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr22:23478200-23483600 Enhancers Primary B cells from peripheral blood blood
15 chr22:23478400-23483600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr22:23478400-23483800 Weak transcription Right Atrium heart
17 chr22:23479400-23487400 Weak transcription Esophagus oesophagus
18 chr22:23479600-23485200 Enhancers Primary hematopoietic stem cells blood
19 chr22:23480000-23487000 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr22:23480200-23483600 Enhancers Rectal Mucosa Donor 29 rectum
21 chr22:23480400-23483600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr22:23480400-23483600 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr22:23480400-23483600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr22:23480400-23483800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr22:23480400-23483800 Weak transcription HUVEC blood vessel
26 chr22:23480400-23483800 Weak transcription NH-A brain
27 chr22:23480600-23483600 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr22:23480600-23483600 Weak transcription Fetal Muscle Leg muscle
29 chr22:23480600-23483800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr22:23480600-23483800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr22:23480800-23483800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr22:23480800-23483800 Weak transcription Fetal Muscle Trunk muscle
33 chr22:23481000-23483600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr22:23481000-23483600 Weak transcription Thymus Thymus
35 chr22:23481000-23483800 Weak transcription Muscle Satellite Cultured Cells --
36 chr22:23481000-23483800 Weak transcription Adipose Nuclei Adipose
37 chr22:23481000-23483800 Weak transcription Placenta Placenta
38 chr22:23481000-23483800 Weak transcription HSMMtube muscle
39 chr22:23481000-23484000 Weak transcription HSMM muscle
40 chr22:23481200-23483600 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr22:23481200-23483600 Weak transcription Colonic Mucosa Colon
42 chr22:23481200-23483600 Weak transcription Duodenum Mucosa Duodenum
43 chr22:23481200-23483800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr22:23481200-23483800 Weak transcription Spleen Spleen
45 chr22:23481200-23484000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr22:23481400-23483600 Weak transcription Primary monocytes fromperipheralblood blood
47 chr22:23481400-23483600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr22:23481400-23483600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr22:23481400-23483600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr22:23481400-23483600 Weak transcription Brain Hippocampus Middle brain

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