Variant report

Variant rs3796840
Chromosome Location chr4:10008121-10008122
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:9998400-10008200 Weak transcription Esophagus oesophagus
2 chr4:9998400-10008400 Weak transcription Brain Angular Gyrus brain
3 chr4:9998400-10020400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr4:10004400-10010200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr4:10004600-10008200 Weak transcription Fetal Muscle Trunk muscle
6 chr4:10004800-10008200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr4:10005000-10008600 Weak transcription Gastric stomach
8 chr4:10006600-10008200 Enhancers Brain Hippocampus Middle brain
9 chr4:10006800-10009000 Enhancers Lung lung
10 chr4:10006800-10009600 Enhancers Primary neutrophils fromperipheralblood blood
11 chr4:10006800-10010200 Enhancers Small Intestine intestine
12 chr4:10006800-10010400 Enhancers Skeletal Muscle Male skeletal muscle
13 chr4:10006800-10012000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr4:10007000-10010000 Enhancers Primary monocytes fromperipheralblood blood
15 chr4:10007000-10010400 Enhancers Fetal Intestine Large intestine
16 chr4:10007000-10010400 Enhancers Right Atrium heart
17 chr4:10007000-10012000 Enhancers Fetal Muscle Leg muscle
18 chr4:10007200-10008200 Enhancers Duodenum Smooth Muscle Duodenum
19 chr4:10007200-10009000 Enhancers Colon Smooth Muscle Colon
20 chr4:10007200-10009200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
21 chr4:10007200-10010000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr4:10007200-10010000 Enhancers HUVEC blood vessel
23 chr4:10007200-10011000 Enhancers Skeletal Muscle Female skeletal muscle
24 chr4:10007200-10011200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr4:10007200-10012200 Enhancers Fetal Lung lung
26 chr4:10007400-10008800 Enhancers Fetal Intestine Small intestine
27 chr4:10007400-10009000 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr4:10007400-10009200 Enhancers Primary B cells from cord blood blood
29 chr4:10007400-10009200 Enhancers Hela-S3 cervix
30 chr4:10007400-10009400 Enhancers Primary B cells from peripheral blood blood
31 chr4:10007400-10009400 Enhancers Osteobl bone
32 chr4:10007400-10009800 Enhancers Fetal Kidney kidney
33 chr4:10007400-10009800 Enhancers Placenta Placenta
34 chr4:10007400-10010000 Enhancers Fetal Adrenal Gland Adrenal Gland
35 chr4:10007400-10010000 Enhancers Sigmoid Colon Sigmoid Colon
36 chr4:10007400-10010400 Enhancers Muscle Satellite Cultured Cells --
37 chr4:10007400-10010600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr4:10007400-10010800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr4:10007400-10010800 Enhancers Pancreas Pancrea
40 chr4:10007600-10008600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr4:10007600-10008600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
42 chr4:10007600-10009000 Weak transcription Brain Inferior Temporal Lobe brain
43 chr4:10007600-10010600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr4:10007600-10011600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr4:10007600-10012800 Enhancers Fetal Stomach stomach
46 chr4:10007600-10013200 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr4:10007800-10008600 Enhancers Primary hematopoietic stem cells blood
48 chr4:10007800-10008600 Enhancers Primary hematopoietic stem cells short term culture blood
49 chr4:10007800-10008600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr4:10007800-10008600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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