Variant report

Variant rs4502681
Chromosome Location chr4:9990172-9990173
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:9963400-9996400 Weak transcription Adipose Nuclei Adipose
2 chr4:9970600-9991200 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr4:9974200-9990400 Weak transcription HSMMtube muscle
4 chr4:9977800-10003600 Weak transcription Fetal Muscle Leg muscle
5 chr4:9978200-9996400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr4:9978800-9995400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr4:9979800-9995600 Weak transcription Colonic Mucosa Colon
8 chr4:9980800-10007200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr4:9981400-9991800 Weak transcription Brain Angular Gyrus brain
10 chr4:9982800-10002800 Weak transcription Gastric stomach
11 chr4:9983000-9991200 Weak transcription Brain Cingulate Gyrus brain
12 chr4:9983000-9992200 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr4:9983000-9995600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr4:9985800-9997400 Strong transcription HMEC breast
15 chr4:9987400-9996400 Weak transcription Aorta Aorta
16 chr4:9987600-9998000 Weak transcription Ovary ovary
17 chr4:9987600-10008000 Weak transcription Stomach Smooth Muscle stomach
18 chr4:9988000-9995000 Weak transcription Esophagus oesophagus
19 chr4:9988200-9991200 Weak transcription Left Ventricle heart
20 chr4:9988200-9991400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr4:9988200-9991600 Weak transcription NHEK skin
22 chr4:9988200-9993800 Weak transcription Liver Liver
23 chr4:9988200-9996400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr4:9988400-9996800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr4:9989200-9999600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr4:9989600-9990200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr4:9989600-9990200 Genic enhancers Monocytes-CD14+_RO01746 blood
28 chr4:9989600-9990400 Genic enhancers Primary monocytes fromperipheralblood blood
29 chr4:9989600-9990400 Flanking Active TSS GM12878-XiMat blood
30 chr4:9989600-9991000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr4:9989600-9991000 Enhancers Brain Anterior Caudate brain
32 chr4:9989600-9991800 Enhancers Brain Hippocampus Middle brain
33 chr4:9989600-9993200 Enhancers Right Atrium heart
34 chr4:9989600-9997600 Strong transcription HepG2 liver
35 chr4:9989600-9997800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr4:9989600-9998800 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr4:9989800-9990600 Enhancers Brain Substantia Nigra brain
38 chr4:9989800-9990600 Enhancers Rectal Smooth Muscle rectum
39 chr4:9989800-9991600 Enhancers Colon Smooth Muscle Colon
40 chr4:9989800-9993600 Weak transcription Duodenum Mucosa Duodenum
41 chr4:9990000-9990200 Enhancers Fetal Brain Female brain
42 chr4:9990000-9990400 Enhancers Fetal Stomach stomach
43 chr4:9990000-9990800 Weak transcription Fetal Intestine Small intestine
44 chr4:9990000-9991600 Weak transcription Fetal Intestine Large intestine
45 chr4:9990000-9997600 Weak transcription Stomach Mucosa stomach

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