Variant report

Variant rs13125476
Chromosome Location chr4:9979614-9979615
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:9911400-9979800 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr4:9958600-9984800 Weak transcription Aorta Aorta
3 chr4:9963400-9996400 Weak transcription Adipose Nuclei Adipose
4 chr4:9964200-9986600 Weak transcription Ovary ovary
5 chr4:9964400-9980800 Weak transcription Esophagus oesophagus
6 chr4:9970000-9988600 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr4:9970000-9989800 Weak transcription Rectal Smooth Muscle rectum
8 chr4:9970400-9982600 Weak transcription Gastric stomach
9 chr4:9970600-9991200 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr4:9972000-9980800 Weak transcription Pancreas Pancrea
11 chr4:9972200-9980600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr4:9972200-9982200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr4:9972200-9988200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:9972200-9988400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr4:9972800-9986800 Weak transcription Placenta Placenta
16 chr4:9972800-9988600 Strong transcription Primary monocytes fromperipheralblood blood
17 chr4:9974200-9989000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr4:9974200-9990400 Weak transcription HSMMtube muscle
19 chr4:9976200-9982800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr4:9977200-9982200 Weak transcription Spleen Spleen
21 chr4:9977600-9986800 Weak transcription Stomach Smooth Muscle stomach
22 chr4:9977600-9988200 Strong transcription HepG2 liver
23 chr4:9977800-10003600 Weak transcription Fetal Muscle Leg muscle
24 chr4:9978200-9988200 Strong transcription NHEK skin
25 chr4:9978200-9996400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr4:9978400-9984400 Strong transcription HMEC breast
27 chr4:9978600-9982000 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
28 chr4:9978600-9983000 Strong transcription Fetal Intestine Large intestine
29 chr4:9978800-9987600 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr4:9978800-9995400 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr4:9979000-9987200 Weak transcription Fetal Stomach stomach
32 chr4:9979200-9983000 Strong transcription Duodenum Mucosa Duodenum
33 chr4:9979400-9980000 Bivalent Enhancer H1 Cell Line embryonic stem cell
34 chr4:9979400-9980000 Enhancers H9 Cell Line embryonic stem cell
35 chr4:9979400-9980000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
36 chr4:9979400-9980000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
37 chr4:9979400-9981400 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr4:9979400-9983000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
39 chr4:9979400-9983200 Strong transcription Liver Liver
40 chr4:9979400-9987400 Strong transcription Fetal Intestine Small intestine
41 chr4:9979600-9979800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr4:9979600-9979800 Strong transcription Lung lung
43 chr4:9979600-9979800 Enhancers GM12878-XiMat blood
44 chr4:9979600-9980600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr4:9979600-9982400 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
46 chr4:9979600-9987200 Weak transcription Left Ventricle heart

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