Variant report

Variant rs3809
Chromosome Location chr14:24909072-24909073
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:24900200-24911000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr14:24900600-24910600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr14:24901400-24910200 Strong transcription Aorta Aorta
4 chr14:24901600-24909800 Weak transcription Fetal Heart heart
5 chr14:24901600-24910400 Strong transcription Placenta Amnion Placenta Amnion
6 chr14:24901800-24910000 Strong transcription Sigmoid Colon Sigmoid Colon
7 chr14:24902000-24909200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr14:24902200-24909400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr14:24902400-24909400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr14:24902400-24909800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr14:24902400-24910200 Strong transcription A549 lung
12 chr14:24902400-24910600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr14:24903000-24910000 Weak transcription Psoas Muscle Psoas
14 chr14:24903000-24910000 Strong transcription NHEK skin
15 chr14:24903400-24909600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr14:24904200-24910200 Genic enhancers Skeletal Muscle Female skeletal muscle
17 chr14:24904400-24910400 Genic enhancers Adipose Nuclei Adipose
18 chr14:24904600-24910400 Strong transcription Fetal Lung lung
19 chr14:24904800-24910400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr14:24905400-24910000 Genic enhancers Primary monocytes fromperipheralblood blood
21 chr14:24905400-24910600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr14:24905400-24910600 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr14:24905400-24911000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
24 chr14:24905800-24910600 Strong transcription HSMM muscle
25 chr14:24906000-24909200 Strong transcription NH-A brain
26 chr14:24906000-24909200 Strong transcription NHLF lung
27 chr14:24906000-24909400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr14:24906000-24909400 Strong transcription Muscle Satellite Cultured Cells --
29 chr14:24906000-24910000 Strong transcription Fetal Intestine Small intestine
30 chr14:24906000-24910200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr14:24906000-24910400 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr14:24906000-24910400 Strong transcription Osteobl bone
33 chr14:24906200-24909400 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr14:24906200-24909800 Strong transcription HepG2 liver
35 chr14:24906200-24910400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr14:24906200-24910400 Genic enhancers Spleen Spleen
37 chr14:24906200-24910600 Strong transcription HUES48 Cell Line embryonic stem cell
38 chr14:24906400-24909400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr14:24906400-24909600 Strong transcription Brain Angular Gyrus brain
40 chr14:24906400-24909800 Strong transcription Brain Cingulate Gyrus brain
41 chr14:24906400-24909800 Strong transcription Brain Substantia Nigra brain
42 chr14:24906400-24909800 Strong transcription Fetal Intestine Large intestine
43 chr14:24906400-24910200 Strong transcription H1 Cell Line embryonic stem cell
44 chr14:24906400-24910400 Strong transcription Rectal Smooth Muscle rectum
45 chr14:24906400-24910600 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr14:24906600-24909200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr14:24906600-24910200 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr14:24906600-24910200 Strong transcription H9 Cell Line embryonic stem cell
49 chr14:24906800-24909200 Strong transcription Brain Germinal Matrix brain
50 chr14:24906800-24909400 Strong transcription Colonic Mucosa Colon

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