Variant report
| Variant | rs3813302 |
|---|---|
| Chromosome Location | chr5:118675319-118675320 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:118659600-118677800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 2 | chr5:118660200-118675600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 3 | chr5:118660200-118678600 | Weak transcription | HepG2 | liver |
| 4 | chr5:118664400-118678200 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr5:118665400-118677000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 6 | chr5:118669200-118675600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 7 | chr5:118669400-118677600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 8 | chr5:118670400-118678200 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 9 | chr5:118670800-118675800 | Weak transcription | Lung | lung |
| 10 | chr5:118670800-118675800 | Weak transcription | Right Atrium | heart |
| 11 | chr5:118670800-118677000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 12 | chr5:118670800-118691000 | Weak transcription | Aorta | Aorta |
| 13 | chr5:118671000-118676000 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 14 | chr5:118671200-118677000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 15 | chr5:118671200-118678400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr5:118671200-118680200 | Enhancers | Thymus | Thymus |
| 17 | chr5:118671200-118681600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr5:118671200-118695400 | Weak transcription | A549 | lung |
| 19 | chr5:118671400-118675800 | Enhancers | Duodenum Mucosa | Duodenum |
| 20 | chr5:118671400-118676000 | Enhancers | Primary B cells from peripheral blood | blood |
| 21 | chr5:118671800-118675800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 22 | chr5:118671800-118680000 | Enhancers | Primary hematopoietic stem cells | blood |
| 23 | chr5:118672200-118675800 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 24 | chr5:118672200-118676800 | Enhancers | Small Intestine | intestine |
| 25 | chr5:118672400-118675800 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 26 | chr5:118672800-118675400 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 27 | chr5:118673000-118676000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 28 | chr5:118673000-118677400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 29 | chr5:118673200-118678600 | Weak transcription | Fetal Lung | lung |
| 30 | chr5:118673200-118679600 | Enhancers | Fetal Heart | heart |
| 31 | chr5:118673200-118683600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 32 | chr5:118673200-118683800 | Weak transcription | Hela-S3 | cervix |
| 33 | chr5:118673400-118675600 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 34 | chr5:118673400-118683000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 35 | chr5:118673600-118675800 | Weak transcription | Fetal Muscle Leg | muscle |
| 36 | chr5:118673600-118677600 | Weak transcription | HSMM | muscle |
| 37 | chr5:118673600-118678200 | Weak transcription | Adipose Nuclei | Adipose |
| 38 | chr5:118673600-118678200 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr5:118673600-118678800 | Enhancers | Fetal Thymus | thymus |
| 40 | chr5:118673800-118675600 | Enhancers | K562 | blood |
| 41 | chr5:118673800-118677600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 42 | chr5:118673800-118683400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 43 | chr5:118674000-118677200 | Weak transcription | NHEK | skin |
| 44 | chr5:118674000-118679800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 45 | chr5:118674200-118675600 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 46 | chr5:118674200-118675600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 47 | chr5:118674200-118675800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 48 | chr5:118674200-118675800 | Enhancers | Primary B cells from cord blood | blood |
| 49 | chr5:118674200-118675800 | Weak transcription | HSMMtube | muscle |
| 50 | chr5:118674200-118676400 | Flanking Active TSS | GM12878-XiMat | blood |
