The 2.0 version of rSNPBase

Variant report

Variant rs72786142
Chromosome Location chr5:118666627-118666628
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118658200-118670400 Weak transcription Lung lung
2 chr5:118659600-118677800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr5:118660200-118675600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr5:118660200-118678600 Weak transcription HepG2 liver
5 chr5:118660400-118668600 Enhancers Primary hematopoietic stem cells blood
6 chr5:118660400-118670400 Weak transcription Right Atrium heart
7 chr5:118661800-118667000 Enhancers Fetal Heart heart
8 chr5:118662200-118667200 Weak transcription HMEC breast
9 chr5:118662600-118667000 Genic enhancers Fetal Thymus thymus
10 chr5:118662600-118669000 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr5:118662600-118670400 Weak transcription Right Ventricle heart
12 chr5:118662800-118668800 Enhancers Primary T cells fromperipheralblood blood
13 chr5:118663000-118667200 Weak transcription Spleen Spleen
14 chr5:118663000-118669600 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr5:118663400-118667600 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr5:118663600-118668600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr5:118663800-118667200 Enhancers Colon Smooth Muscle Colon
18 chr5:118663800-118667600 Enhancers Duodenum Mucosa Duodenum
19 chr5:118663800-118669200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
20 chr5:118664000-118667400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
21 chr5:118664000-118667600 Enhancers Sigmoid Colon Sigmoid Colon
22 chr5:118664000-118668800 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr5:118664200-118667600 Enhancers Placenta Placenta
24 chr5:118664200-118668400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr5:118664200-118671600 Weak transcription Small Intestine intestine
26 chr5:118664200-118673400 Enhancers Primary neutrophils fromperipheralblood blood
27 chr5:118664400-118678200 Weak transcription Fetal Kidney kidney
28 chr5:118664600-118669200 Enhancers Colonic Mucosa Colon
29 chr5:118664800-118668800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
30 chr5:118664800-118670600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr5:118664800-118673000 Weak transcription HSMM muscle
32 chr5:118665000-118667200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr5:118665000-118667600 Enhancers Esophagus oesophagus
34 chr5:118665000-118667600 Enhancers Pancreas Pancrea
35 chr5:118665000-118668400 Weak transcription A549 lung
36 chr5:118665000-118670400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:118665000-118670600 Weak transcription Placenta Amnion Placenta Amnion
38 chr5:118665000-118672600 Weak transcription Hela-S3 cervix
39 chr5:118665200-118666800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
40 chr5:118665200-118667000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
41 chr5:118665200-118669200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr5:118665200-118670400 Weak transcription Osteobl bone
43 chr5:118665400-118667000 Flanking Active TSS K562 blood
44 chr5:118665400-118667600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
45 chr5:118665400-118670600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr5:118665400-118670600 Weak transcription NHLF lung
47 chr5:118665400-118677000 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr5:118665600-118667000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
49 chr5:118665600-118667200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr5:118665600-118667400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015