Variant report
| Variant | rs3847540 |
|---|---|
| Chromosome Location | chr11:92579329-92579330 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:92572400-92582000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr11:92572600-92580800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 3 | chr11:92572800-92584400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 4 | chr11:92573600-92586400 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 5 | chr11:92574400-92586000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr11:92574800-92580000 | Enhancers | NHEK | skin |
| 7 | chr11:92574800-92580200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr11:92575000-92581400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 9 | chr11:92575200-92579800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 10 | chr11:92575200-92580000 | Enhancers | HMEC | breast |
| 11 | chr11:92575400-92579600 | Weak transcription | NH-A | brain |
| 12 | chr11:92576200-92580000 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 13 | chr11:92576400-92579800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 14 | chr11:92576400-92579800 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 15 | chr11:92577200-92579800 | Enhancers | Colonic Mucosa | Colon |
| 16 | chr11:92577200-92580600 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 17 | chr11:92577800-92589600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 18 | chr11:92577800-92592000 | Weak transcription | Aorta | Aorta |
| 19 | chr11:92578000-92579400 | Enhancers | Fetal Muscle Leg | muscle |
| 20 | chr11:92578000-92580800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 21 | chr11:92578000-92586200 | Weak transcription | Lung | lung |
| 22 | chr11:92578000-92590200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 23 | chr11:92578200-92579400 | Genic enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 24 | chr11:92578200-92580400 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 25 | chr11:92578200-92587400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 26 | chr11:92578200-92592000 | Weak transcription | Brain Anterior Caudate | brain |
| 27 | chr11:92578200-92598600 | Weak transcription | Fetal Brain Male | brain |
| 28 | chr11:92578400-92579600 | Enhancers | Fetal Intestine Large | intestine |
| 29 | chr11:92578600-92579400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 30 | chr11:92578600-92579400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 31 | chr11:92578600-92579800 | Enhancers | Fetal Stomach | stomach |
| 32 | chr11:92578600-92579800 | Enhancers | NHLF | lung |
| 33 | chr11:92578600-92582600 | Weak transcription | Brain Angular Gyrus | brain |
| 34 | chr11:92578600-92586200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 35 | chr11:92578600-92592200 | Weak transcription | Fetal Brain Female | brain |
| 36 | chr11:92578800-92581000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 37 | chr11:92578800-92584800 | Weak transcription | Fetal Kidney | kidney |
| 38 | chr11:92578800-92586200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 39 | chr11:92579000-92579400 | Enhancers | Fetal Thymus | thymus |
| 40 | chr11:92579000-92586200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 41 | chr11:92579000-92586200 | Weak transcription | Fetal Lung | lung |
| 42 | chr11:92579200-92579400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 43 | chr11:92579200-92579600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 44 | chr11:92579200-92580200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
