Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10160794	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10767941	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs10835917	0.80[CEU][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs10835920	0.81[ASN][1000 genomes]
rs10835924	0.88[ASN][1000 genomes]
rs10835925	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10835927	0.96[ASN][1000 genomes]
rs11031812	0.87[ASN][1000 genomes]
rs11031814	0.87[ASN][1000 genomes]
rs12282155	0.96[ASN][1000 genomes]
rs2418910	0.85[CHD][hapmap];0.89[JPT][hapmap]
rs2418931	0.86[ASN][1000 genomes]
rs2900741	0.87[CHD][hapmap];0.89[JPT][hapmap]
rs3858449	0.83[CHD][hapmap]
rs3858454	0.88[CEU][hapmap];0.80[CHD][hapmap];0.89[JPT][hapmap]
rs3858459	0.90[ASN][1000 genomes]
rs4963209	0.87[ASN][1000 genomes]
rs5030141	0.83[CHD][hapmap]
rs6484580	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7101917	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7103780	0.85[AMR][1000 genomes]
rs7129461	0.85[AMR][1000 genomes]
rs7944133	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs3858461	WT1AS	cis	cerebellum	SCAN
rs3858461	ELP4	cis	lymphoblastoid	seeQTL

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32488400-32499200	Weak transcription	K562	blood
2	chr11:32494000-32499200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr11:32494200-32499200	Weak transcription	Dnd41	blood

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