Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10160794	0.85[ASN][1000 genomes]
rs10219425	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10835911	0.85[EUR][1000 genomes]
rs10835916	0.87[EUR][1000 genomes]
rs10835917	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10835920	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10835925	0.90[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs10835927	0.84[ASN][1000 genomes]
rs11031791	0.86[EUR][1000 genomes]
rs11031792	0.86[EUR][1000 genomes]
rs11031793	0.85[EUR][1000 genomes]
rs11031796	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12282155	0.84[ASN][1000 genomes]
rs3858454	0.87[EUR][1000 genomes]
rs3858455	0.87[EUR][1000 genomes]
rs3858456	0.87[EUR][1000 genomes]
rs3858459	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3858460	0.81[ASN][1000 genomes]
rs3858461	0.86[ASN][1000 genomes]
rs3930317	0.87[EUR][1000 genomes]
rs4275604	0.84[EUR][1000 genomes]
rs4304749	0.86[EUR][1000 genomes]
rs4980793	0.85[EUR][1000 genomes]
rs7101917	0.93[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7103000	0.85[EUR][1000 genomes]
rs7126322	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7395210	0.87[EUR][1000 genomes]
rs7944133	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7948813	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	esv2753303	chr11:32447324-32494924	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32488400-32499200	Weak transcription	K562	blood
2	chr11:32490200-32491600	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr11:32490200-32491600	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr11:32491000-32493600	Weak transcription	Dnd41	blood

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