The 2.0 version of rSNPBase

Variant report

Variant rs3869067
Chromosome Location chr6:30003797-30003798
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29975200-30027800 Weak transcription Aorta Aorta
2 chr6:29975600-30027800 Weak transcription Right Ventricle heart
3 chr6:29975800-30027800 Weak transcription Gastric stomach
4 chr6:29976600-30023000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr6:29977200-30003800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr6:29977200-30024600 Weak transcription Brain Anterior Caudate brain
7 chr6:29977200-30027600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr6:29977200-30027800 Weak transcription Fetal Intestine Small intestine
9 chr6:29979000-30027600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr6:29979400-30024600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:29979600-30022800 Weak transcription Ovary ovary
12 chr6:29979800-30027800 Weak transcription Pancreas Pancrea
13 chr6:29980200-30012000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr6:29981200-30023000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr6:29981800-30010600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr6:29982800-30009800 Weak transcription Psoas Muscle Psoas
17 chr6:29982800-30022800 Weak transcription Fetal Muscle Leg muscle
18 chr6:29983400-30012400 Weak transcription NHEK skin
19 chr6:29984600-30023400 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr6:29985000-30024600 Weak transcription Brain Angular Gyrus brain
21 chr6:29985400-30008200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr6:29987800-30010600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:29987800-30024800 Weak transcription Fetal Intestine Large intestine
24 chr6:29988000-30010400 Weak transcription Fetal Muscle Trunk muscle
25 chr6:29988200-30009800 Weak transcription HepG2 liver
26 chr6:29988200-30022800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr6:29988200-30027800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr6:29988200-30027800 Weak transcription Esophagus oesophagus
29 chr6:29988400-30006200 Weak transcription Brain Cingulate Gyrus brain
30 chr6:29988400-30021600 Weak transcription Primary hematopoietic stem cells blood
31 chr6:29988400-30023400 Weak transcription Adipose Nuclei Adipose
32 chr6:29988400-30027800 Weak transcription Thymus Thymus
33 chr6:29988600-30003800 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr6:29988600-30009800 Weak transcription Left Ventricle heart
35 chr6:29988600-30022200 Weak transcription Stomach Smooth Muscle stomach
36 chr6:29988600-30027400 Weak transcription Duodenum Mucosa Duodenum
37 chr6:29988800-30022800 Weak transcription Brain Hippocampus Middle brain
38 chr6:29989000-30009800 Weak transcription GM12878-XiMat blood
39 chr6:29989000-30023000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr6:29989400-30021400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr6:29996600-30012200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr6:29998000-30027600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr6:29998400-30012200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:29998400-30012200 Weak transcription HMEC breast
45 chr6:29999200-30027200 Weak transcription Fetal Heart heart
46 chr6:29999800-30012400 Weak transcription Hela-S3 cervix
47 chr6:29999800-30022200 Weak transcription Primary B cells from peripheral blood blood
48 chr6:30000000-30027400 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr6:30001200-30025000 Weak transcription Fetal Lung lung
50 chr6:30001200-30027800 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015