Variant report

Variant	rs4016126
Chromosome Location	chr11:76721965-76721966
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76720280..76722023-chr11:76833926..76836450,2	MCF-7	breast:
2	chr11:76721230..76723722-chr11:76724373..76726588,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10899314	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs11237030	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11602065	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs11605656	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12223477	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs17812687	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1945084	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1945085	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2048954	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs2187499	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2279518	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs3740766	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3740768	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3862808	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4944130	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4944133	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4945128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55798841	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55977032	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56129156	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56789915	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61900090	0.80[EUR][1000 genomes]
rs61900119	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61900120	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7118398	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76675000-76725600	Weak transcription	A549	lung
2	chr11:76675000-76729600	Weak transcription	Brain Angular Gyrus	brain
3	chr11:76683000-76736400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr11:76683200-76729200	Weak transcription	Brain Hippocampus Middle	brain
5	chr11:76683600-76728000	Weak transcription	Brain Anterior Caudate	brain
6	chr11:76689200-76734600	Weak transcription	Liver	Liver
7	chr11:76689600-76737000	Weak transcription	Pancreas	Pancrea
8	chr11:76689800-76731400	Weak transcription	Ovary	ovary
9	chr11:76690000-76722000	Weak transcription	Aorta	Aorta
10	chr11:76690000-76723800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr11:76690000-76735800	Weak transcription	Rectal Smooth Muscle	rectum
12	chr11:76690200-76722000	Weak transcription	Spleen	Spleen
13	chr11:76690200-76729000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr11:76690200-76736800	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr11:76690400-76734600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
16	chr11:76693800-76734800	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr11:76694000-76738600	Weak transcription	HSMMtube	muscle
18	chr11:76696200-76738000	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr11:76696400-76726600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr11:76696600-76722200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr11:76696600-76725600	Weak transcription	Small Intestine	intestine
22	chr11:76696600-76726800	Weak transcription	Esophagus	oesophagus
23	chr11:76697000-76726600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr11:76698000-76726600	Weak transcription	NHDF-Ad	bronchial
25	chr11:76699800-76731200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr11:76700000-76729800	Weak transcription	Left Ventricle	heart
27	chr11:76701200-76738400	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr11:76702600-76736000	Weak transcription	Brain Substantia Nigra	brain
29	chr11:76705600-76735600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr11:76707200-76730800	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr11:76707600-76730400	Weak transcription	Fetal Brain Male	brain
32	chr11:76709600-76732400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
33	chr11:76709600-76733200	Weak transcription	Fetal Lung	lung
34	chr11:76709800-76728000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr11:76709800-76731200	Weak transcription	HUES48 Cell Line	embryonic stem cell
36	chr11:76711000-76726600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr11:76711200-76734600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr11:76712200-76733600	Weak transcription	Psoas Muscle	Psoas
39	chr11:76714400-76726600	Weak transcription	Fetal Intestine Large	intestine
40	chr11:76715800-76726400	Weak transcription	Hela-S3	cervix
41	chr11:76716200-76734800	Strong transcription	Primary monocytes fromperipheralblood	blood
42	chr11:76716400-76739800	Weak transcription	Colonic Mucosa	Colon
43	chr11:76717200-76731200	Weak transcription	HSMM	muscle
44	chr11:76717600-76722000	Weak transcription	HUVEC	blood vessel
45	chr11:76718000-76733600	Weak transcription	Right Ventricle	heart
46	chr11:76718200-76722000	Weak transcription	Gastric	stomach
47	chr11:76718200-76724200	Weak transcription	Dnd41	blood
48	chr11:76718200-76731200	Weak transcription	Primary T cells from cord blood	blood
49	chr11:76718400-76722800	Strong transcription	Placenta	Placenta
50	chr11:76718600-76726600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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