Variant report

Variant	rs4074694
Chromosome Location	chr8:10874470-10874471
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:10867872..10870530-chr8:10872109..10874885,2	K562	blood:
2	chr8:10861649..10864572-chr8:10871901..10875246,3	K562	blood:
3	chr8:10869029..10871589-chr8:10873580..10875933,2	MCF-7	breast:
4	chr8:10786051..10786569-chr8:10873648..10874515,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10087512	1.00[AFR][1000 genomes]
rs10105947	0.83[AFR][1000 genomes]
rs4074692	1.00[AFR][1000 genomes]
rs4074693	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035072	chr8:10819444-11480692	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv539473	chr8:10819444-11480692	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv1022434	chr8:10866242-10916523	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10872400-10874600	Bivalent/Poised TSS	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr8:10872400-10874600	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr8:10872400-10874600	Flanking Active TSS	Adipose Nuclei	Adipose
4	chr8:10872400-10874600	Active TSS	Brain Angular Gyrus	brain
5	chr8:10872400-10874600	Active TSS	Duodenum Smooth Muscle	Duodenum
6	chr8:10872400-10874600	Bivalent Enhancer	Fetal Brain Male	brain
7	chr8:10872400-10874600	Active TSS	HSMMtube	muscle
8	chr8:10872600-10874600	Active TSS	H1 Cell Line	embryonic stem cell
9	chr8:10872600-10874600	Active TSS	Breast Myoepithelial Primary Cells	Breast
10	chr8:10872600-10874600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr8:10872600-10874600	Active TSS	Primary T killer memory cells from peripheral blood	blood
12	chr8:10872600-10874600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
13	chr8:10872600-10874600	Active TSS	HSMM	muscle
14	chr8:10872800-10874600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
15	chr8:10872800-10874600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr8:10872800-10874600	Active TSS	Ovary	ovary
17	chr8:10872800-10874600	Bivalent/Poised TSS	NHLF	lung
18	chr8:10873000-10874600	Flanking Active TSS	Primary hematopoietic stem cells	blood
19	chr8:10873000-10874600	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
20	chr8:10873000-10875000	Active TSS	Gastric	stomach
21	chr8:10873200-10874600	Bivalent/Poised TSS	HepG2	liver
22	chr8:10873200-10874600	Bivalent/Poised TSS	NHDF-Ad	bronchial
23	chr8:10873400-10874600	Bivalent/Poised TSS	Fetal Lung	lung
24	chr8:10873400-10874600	Active TSS	K562	blood
25	chr8:10873600-10874600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr8:10873600-10874600	Active TSS	GM12878-XiMat	blood
27	chr8:10873600-10875000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr8:10873800-10874600	Bivalent/Poised TSS	Fetal Stomach	stomach
29	chr8:10873800-10874800	Active TSS	NH-A	brain
30	chr8:10874000-10874600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr8:10874000-10874600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr8:10874000-10874600	Bivalent/Poised TSS	Thymus	Thymus
33	chr8:10874200-10874600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
34	chr8:10874200-10874600	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr8:10874200-10874600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr8:10874200-10874600	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
37	chr8:10874200-10874600	Flanking Active TSS	Primary B cells from cord blood	blood
38	chr8:10874200-10874600	Flanking Active TSS	Primary B cells from peripheral blood	blood
39	chr8:10874200-10874600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
40	chr8:10874200-10874600	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
41	chr8:10874200-10874600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
42	chr8:10874200-10874600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
43	chr8:10874200-10874600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
44	chr8:10874200-10874600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
45	chr8:10874200-10874600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
46	chr8:10874200-10874600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
47	chr8:10874200-10874600	Flanking Active TSS	Brain Germinal Matrix	brain
48	chr8:10874200-10874600	Flanking Bivalent TSS/Enh	Duodenum Mucosa	Duodenum
49	chr8:10874200-10874600	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
50	chr8:10874200-10874600	Flanking Active TSS	Fetal Heart	heart

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