Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10789540	0.92[ASN][1000 genomes]
rs10890569	0.88[ASN][1000 genomes]
rs11604982	0.94[ASN][1000 genomes]
rs11608184	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12788085	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12798695	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12800630	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12803679	0.94[ASN][1000 genomes]
rs1487908	0.89[ASN][1000 genomes]
rs1565161	0.89[ASN][1000 genomes]
rs1601806	0.88[ASN][1000 genomes]
rs17565192	0.95[ASN][1000 genomes]
rs17649831	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17650551	0.97[ASN][1000 genomes]
rs2220375	0.92[ASN][1000 genomes]
rs67740566	0.94[ASN][1000 genomes]
rs67981963	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7103063	0.92[ASN][1000 genomes]
rs7126017	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7126092	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7129036	0.92[ASN][1000 genomes]
rs7950329	0.94[ASN][1000 genomes]
rs7950851	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898359	chr11:106523574-106656863	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106552800-106628200	Weak transcription	Pancreas	Pancrea
2	chr11:106607800-106629000	Weak transcription	Fetal Lung	lung

Quick Search: