The 2.0 version of rSNPBase

Variant report

Variant rs41309179
Chromosome Location chr1:67056379-67056380
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67041600-67062400 Weak transcription Stomach Smooth Muscle stomach
2 chr1:67043200-67056800 Weak transcription Brain Anterior Caudate brain
3 chr1:67043200-67064400 Weak transcription Brain Inferior Temporal Lobe brain
4 chr1:67043600-67066600 Weak transcription Fetal Brain Male brain
5 chr1:67044000-67057200 Weak transcription Aorta Aorta
6 chr1:67044200-67064000 Weak transcription NH-A brain
7 chr1:67044800-67064000 Weak transcription Osteobl bone
8 chr1:67046400-67060400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:67049600-67062600 Weak transcription Psoas Muscle Psoas
10 chr1:67051000-67060400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:67051000-67061600 Weak transcription Brain Hippocampus Middle brain
12 chr1:67051000-67064200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:67051000-67064400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:67051000-67065000 Weak transcription Brain Cingulate Gyrus brain
15 chr1:67051200-67056400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:67051200-67059000 Weak transcription NHLF lung
17 chr1:67051200-67063200 Weak transcription NHDF-Ad bronchial
18 chr1:67051200-67064200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:67051200-67064400 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:67051200-67064400 Weak transcription Brain Substantia Nigra brain
21 chr1:67051200-67066200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:67052200-67070800 Weak transcription Fetal Heart heart
23 chr1:67053800-67062200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:67055400-67064200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:67055400-67073000 Weak transcription Left Ventricle heart
26 chr1:67055600-67061400 Weak transcription Fetal Brain Female brain
27 chr1:67055800-67056800 Weak transcription HepG2 liver
28 chr1:67056000-67056600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:67056000-67057400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:67056200-67057200 Strong transcription Muscle Satellite Cultured Cells --
31 chr1:67056200-67058000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:67056200-67061000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015