Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:147525612..147528709-chr5:147529097..147534248,4	MCF-7	breast:
2	chr5:147523792..147526383-chr5:147529458..147531913,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1422988	1.00[AMR][1000 genomes]
rs56683639	1.00[AMR][1000 genomes]
rs57180635	1.00[AMR][1000 genomes]
rs6891761	1.00[AMR][1000 genomes]
rs73271122	1.00[AMR][1000 genomes]
rs73271138	1.00[AMR][1000 genomes]
rs73271140	1.00[AMR][1000 genomes]
rs73271146	1.00[AMR][1000 genomes]
rs73271150	1.00[AMR][1000 genomes]
rs73271166	1.00[AMR][1000 genomes]
rs73271167	1.00[AMR][1000 genomes]
rs73271170	1.00[AMR][1000 genomes]
rs73271171	1.00[AMR][1000 genomes]
rs73271175	1.00[AMR][1000 genomes]
rs73271180	1.00[AMR][1000 genomes]
rs73271184	1.00[AMR][1000 genomes]
rs73271186	1.00[AMR][1000 genomes]
rs7710036	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7727191	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7730524	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7734032	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883015	chr5:147404281-147751035	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv830515	chr5:147460852-147602247	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:147526600-147531200	Weak transcription	HUVEC	blood vessel
2	chr5:147527800-147532400	Weak transcription	Fetal Intestine Large	intestine
3	chr5:147528000-147533200	Weak transcription	Fetal Intestine Small	intestine

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