Variant report

Variant	rs4151495
Chromosome Location	chr13:48940117-48940118
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs3092863	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4151419	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4151432	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4151545	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4151581	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4151627	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7320277	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7327171	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7329387	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7333971	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7982092	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7982457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8000807	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8002958	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9331979	1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9331993	1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9332001	1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9332059	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs9332073	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9332267	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9332279	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9332286	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9332306	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:99 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:48908400-48944800	Weak transcription	Small Intestine	intestine
2	chr13:48909000-48972200	Weak transcription	NHEK	skin
3	chr13:48911800-48948400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr13:48912200-48968200	Weak transcription	Brain Cingulate Gyrus	brain
5	chr13:48913400-48944200	Weak transcription	Aorta	Aorta
6	chr13:48914000-48944400	Weak transcription	Fetal Stomach	stomach
7	chr13:48914000-48965800	Weak transcription	Lung	lung
8	chr13:48914800-48972000	Weak transcription	NHLF	lung
9	chr13:48916200-48947400	Weak transcription	Fetal Brain Male	brain
10	chr13:48916400-48948400	Weak transcription	NH-A	brain
11	chr13:48916800-48985400	Weak transcription	Colonic Mucosa	Colon
12	chr13:48917800-48944400	Weak transcription	HepG2	liver
13	chr13:48918000-48954400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
14	chr13:48918600-48967200	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr13:48920200-48974400	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr13:48921600-48972000	Weak transcription	Stomach Mucosa	stomach
17	chr13:48925000-48944200	Weak transcription	HSMMtube	muscle
18	chr13:48925000-48962800	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr13:48925200-48947400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr13:48925200-48949000	Weak transcription	Fetal Kidney	kidney
21	chr13:48925200-48974800	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr13:48925400-48948200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr13:48925400-48976400	Weak transcription	Ovary	ovary
24	chr13:48925600-48968000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr13:48925800-48943600	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr13:48926200-48949200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr13:48926200-48954600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
28	chr13:48926400-48943400	Weak transcription	Left Ventricle	heart
29	chr13:48926800-48972000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
30	chr13:48928000-48948000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
31	chr13:48928200-48948400	Weak transcription	Primary neutrophils fromperipheralblood	blood
32	chr13:48928200-48948400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
33	chr13:48928200-48954400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr13:48928200-48954600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr13:48928200-48971800	Weak transcription	A549	lung
36	chr13:48928400-48941400	Weak transcription	HUVEC	blood vessel
37	chr13:48928400-48943600	Weak transcription	Adipose Nuclei	Adipose
38	chr13:48928400-48944400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr13:48928400-48952800	Weak transcription	Fetal Heart	heart
40	chr13:48928400-48963800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
41	chr13:48928600-48943400	Weak transcription	Muscle Satellite Cultured Cells	--
42	chr13:48929000-48943400	Weak transcription	Cortex derived primary cultured neurospheres	brain
43	chr13:48929200-48944400	Weak transcription	Psoas Muscle	Psoas
44	chr13:48929400-48948400	Weak transcription	Primary T helper cells PMA-I stimulated	--
45	chr13:48929600-48943400	Weak transcription	Fetal Muscle Leg	muscle
46	chr13:48929800-48968400	Weak transcription	Esophagus	oesophagus
47	chr13:48930200-48943400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr13:48932200-48948400	Weak transcription	Duodenum Mucosa	Duodenum
49	chr13:48932600-48944200	Weak transcription	Fetal Muscle Trunk	muscle
50	chr13:48932600-48948400	Weak transcription	GM12878-XiMat	blood

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