The 2.0 version of rSNPBase

Variant report

Variant rs7333971
Chromosome Location chr13:48946743-48946744
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48909000-48972200 Weak transcription NHEK skin
2 chr13:48911800-48948400 Weak transcription Stomach Smooth Muscle stomach
3 chr13:48912200-48968200 Weak transcription Brain Cingulate Gyrus brain
4 chr13:48914000-48965800 Weak transcription Lung lung
5 chr13:48914800-48972000 Weak transcription NHLF lung
6 chr13:48916200-48947400 Weak transcription Fetal Brain Male brain
7 chr13:48916400-48948400 Weak transcription NH-A brain
8 chr13:48916800-48985400 Weak transcription Colonic Mucosa Colon
9 chr13:48918000-48954400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr13:48918600-48967200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr13:48920200-48974400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr13:48921600-48972000 Weak transcription Stomach Mucosa stomach
13 chr13:48925000-48962800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr13:48925200-48947400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr13:48925200-48949000 Weak transcription Fetal Kidney kidney
16 chr13:48925200-48974800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr13:48925400-48948200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr13:48925400-48976400 Weak transcription Ovary ovary
19 chr13:48925600-48968000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr13:48926200-48949200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr13:48926200-48954600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr13:48926800-48972000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr13:48928000-48948000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr13:48928200-48948400 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr13:48928200-48948400 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr13:48928200-48954400 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr13:48928200-48954600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr13:48928200-48971800 Weak transcription A549 lung
29 chr13:48928400-48952800 Weak transcription Fetal Heart heart
30 chr13:48928400-48963800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr13:48929400-48948400 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr13:48929800-48968400 Weak transcription Esophagus oesophagus
33 chr13:48932200-48948400 Weak transcription Duodenum Mucosa Duodenum
34 chr13:48932600-48948400 Weak transcription GM12878-XiMat blood
35 chr13:48932600-48957600 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr13:48932800-48957400 Weak transcription Brain Substantia Nigra brain
37 chr13:48933200-48954400 Weak transcription Colon Smooth Muscle Colon
38 chr13:48933400-48974000 Weak transcription Rectal Smooth Muscle rectum
39 chr13:48934400-48948400 Weak transcription Thymus Thymus
40 chr13:48934600-48984200 Weak transcription Right Ventricle heart
41 chr13:48934800-48948000 Weak transcription Fetal Lung lung
42 chr13:48934800-48948200 Weak transcription Brain Hippocampus Middle brain
43 chr13:48934800-48949000 Weak transcription Fetal Intestine Large intestine
44 chr13:48935000-48948400 Weak transcription Primary T cells fromperipheralblood blood
45 chr13:48935400-48968200 Weak transcription Spleen Spleen
46 chr13:48936000-48974600 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr13:48936200-48968200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr13:48936400-48973200 Weak transcription Hela-S3 cervix
49 chr13:48937800-48964000 Weak transcription Fetal Intestine Small intestine
50 chr13:48938000-48949200 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015