The 2.0 version of rSNPBase

Variant report

Variant rs4235795
Chromosome Location chr5:112529209-112529210
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112514400-112530600 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr5:112515800-112530200 Weak transcription Psoas Muscle Psoas
3 chr5:112515800-112538000 Weak transcription Fetal Kidney kidney
4 chr5:112518600-112538600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:112522000-112538800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr5:112522600-112530600 Weak transcription Adipose Nuclei Adipose
7 chr5:112522600-112534800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr5:112522600-112535200 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr5:112522600-112535200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr5:112522600-112541000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:112522800-112535000 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr5:112524800-112531200 Weak transcription Brain Substantia Nigra brain
13 chr5:112524800-112531800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr5:112525800-112530600 Weak transcription Right Ventricle heart
15 chr5:112525800-112533400 Weak transcription Spleen Spleen
16 chr5:112526200-112530200 Weak transcription Left Ventricle heart
17 chr5:112526400-112535000 Weak transcription NH-A brain
18 chr5:112526600-112531000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr5:112526600-112535000 Weak transcription NHDF-Ad bronchial
20 chr5:112526600-112535200 Weak transcription Muscle Satellite Cultured Cells --
21 chr5:112526800-112529400 Weak transcription Liver Liver
22 chr5:112526800-112530600 Weak transcription Lung lung
23 chr5:112526800-112535000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr5:112526800-112535000 Weak transcription HMEC breast
25 chr5:112527000-112529400 Weak transcription Fetal Heart heart
26 chr5:112527200-112530200 Weak transcription Ovary ovary
27 chr5:112527400-112530000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr5:112527400-112530800 Weak transcription NHEK skin
29 chr5:112527400-112538800 Weak transcription Esophagus oesophagus
30 chr5:112527600-112529800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr5:112527800-112530600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr5:112527800-112533800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr5:112528000-112530400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr5:112528400-112530200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:112528600-112538600 Weak transcription Stomach Smooth Muscle stomach
36 chr5:112529000-112530000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr5:112529000-112531400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr5:112529000-112532200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr5:112529000-112538800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr5:112529200-112530400 Enhancers HepG2 liver
41 chr5:112529200-112530600 Weak transcription Fetal Lung lung
42 chr5:112529200-112533600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015