Variant report
Variant | rs4317179 |
---|---|
Chromosome Location | chr4:47045377-47045378 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10015366 | 0.87[ASW][hapmap];0.83[MKK][hapmap] |
rs12507012 | 0.95[ASN][1000 genomes] |
rs13105212 | 0.85[JPT][hapmap] |
rs1442099 | 0.85[JPT][hapmap] |
rs1442101 | 0.85[JPT][hapmap] |
rs3906823 | 0.85[JPT][hapmap] |
rs4315750 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs4374601 | 0.82[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs4396968 | 0.83[JPT][hapmap] |
rs4501194 | 0.85[JPT][hapmap] |
rs4521322 | 0.84[ASN][1000 genomes] |
rs4597805 | 0.87[ASW][hapmap];0.92[JPT][hapmap];0.93[TSI][hapmap];0.88[ASN][1000 genomes] |
rs6447534 | 0.85[JPT][hapmap] |
rs6829206 | 0.83[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs6837255 | 0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs6846701 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs7666212 | 0.85[JPT][hapmap] |
rs7680321 | 0.85[JPT][hapmap] |
rs7680746 | 0.85[JPT][hapmap] |
rs9291304 | 0.83[JPT][hapmap] |
rs993776 | 0.91[JPT][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3395099 | chr4:47043545-47045643 | Enhancers Weak transcription | n/a | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:47036200-47050200 | Weak transcription | Brain Anterior Caudate | brain |