Variant report

Variant	rs433143
Chromosome Location	chr14:65275259-65275260
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1271040	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs151165	0.85[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.84[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1741464	0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs1741466	0.87[CEU][hapmap];0.86[EUR][1000 genomes]
rs17767662	0.80[CHB][hapmap];0.86[ASN][1000 genomes]
rs192036	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2038433	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2269295	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2269296	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2269297	0.84[CEU][hapmap];0.88[EUR][1000 genomes]
rs229580	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[YRI][hapmap]
rs229581	0.80[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs229587	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs229588	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[YRI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs229589	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs229591	0.92[CEU][hapmap]
rs229628	0.83[CEU][hapmap]
rs229672	0.86[ASN][1000 genomes]
rs229673	0.93[YRI][hapmap];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs229675	0.86[ASN][1000 genomes]
rs230703	0.83[CEU][hapmap];0.81[EUR][1000 genomes]
rs230704	0.83[CEU][hapmap];0.81[EUR][1000 genomes]
rs368194	0.87[CEU][hapmap];0.87[EUR][1000 genomes]
rs375510	0.87[EUR][1000 genomes]
rs3819928	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4902317	0.92[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8017385	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65254000-65282600	Weak transcription	Spleen	Spleen
2	chr14:65262000-65289800	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr14:65268400-65290200	Weak transcription	Brain Germinal Matrix	brain
4	chr14:65271400-65289800	Weak transcription	Brain Anterior Caudate	brain
5	chr14:65272400-65275800	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr14:65272600-65275800	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr14:65273000-65279200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr14:65273200-65279000	Weak transcription	Pancreas	Pancrea
9	chr14:65273400-65277200	Weak transcription	Aorta	Aorta
10	chr14:65273400-65279000	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr14:65273800-65279000	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr14:65273800-65287200	Weak transcription	K562	blood
13	chr14:65274000-65278200	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr14:65274200-65275800	Enhancers	Psoas Muscle	Psoas
15	chr14:65274200-65278800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr14:65274400-65278400	Weak transcription	NHEK	skin
17	chr14:65274600-65276400	Weak transcription	Hela-S3	cervix
18	chr14:65274600-65278400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr14:65274600-65278400	Weak transcription	HMEC	breast
20	chr14:65274600-65279000	Weak transcription	Fetal Thymus	thymus
21	chr14:65274600-65284600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr14:65274800-65278200	Weak transcription	A549	lung
23	chr14:65274800-65278800	Weak transcription	Left Ventricle	heart
24	chr14:65274800-65279000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr14:65274800-65279000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr14:65274800-65279000	Weak transcription	Lung	lung
27	chr14:65274800-65279000	Weak transcription	Right Atrium	heart
28	chr14:65274800-65279200	Weak transcription	Fetal Heart	heart
29	chr14:65275000-65281800	Weak transcription	Right Ventricle	heart
30	chr14:65275200-65277000	Weak transcription	Fetal Muscle Leg	muscle

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