Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:126490839..126493464-chr8:126493478..126495853,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10956250	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12164213	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12547199	0.82[JPT][hapmap]
rs12679547	0.84[CEU][hapmap]
rs12681878	0.99[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13258507	0.85[CEU][hapmap]
rs16900644	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17406109	0.82[TSI][hapmap]
rs35192929	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4552916	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4567057	0.82[TSI][hapmap]
rs4567059	0.82[TSI][hapmap]
rs4592055	0.80[CEU][hapmap]
rs4870942	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6470358	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6470359	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6987702	0.90[ASN][1000 genomes]
rs6989280	0.81[CEU][hapmap];0.95[CHD][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs7005535	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7846135	0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126483000-126498200	Weak transcription	Right Atrium	heart
2	chr8:126483400-126496600	Weak transcription	Hela-S3	cervix
3	chr8:126487600-126496600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:126488000-126497200	Weak transcription	Liver	Liver
5	chr8:126492000-126496600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr8:126492400-126496800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr8:126492600-126496600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr8:126493200-126495000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:126493200-126497600	Weak transcription	Primary B cells from cord blood	blood
10	chr8:126493600-126494800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:126493600-126494800	Weak transcription	NHLF	lung
12	chr8:126493600-126495000	Enhancers	A549	lung
13	chr8:126493600-126496600	Weak transcription	Primary neutrophils fromperipheralblood	blood
14	chr8:126493800-126496600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr8:126493800-126496600	Weak transcription	HMEC	breast
16	chr8:126493800-126496600	Weak transcription	NHDF-Ad	bronchial
17	chr8:126494400-126495000	Enhancers	Fetal Lung	lung
18	chr8:126494400-126495000	Enhancers	NHEK	skin

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