Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10956250	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12164213	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12677676	0.84[EUR][1000 genomes]
rs12681878	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs13271368	0.82[EUR][1000 genomes]
rs16900644	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34087092	0.83[EUR][1000 genomes]
rs35192929	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs35309034	0.85[EUR][1000 genomes]
rs4350001	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4552916	0.96[ASN][1000 genomes]
rs4870941	0.85[EUR][1000 genomes]
rs55921265	0.84[EUR][1000 genomes]
rs6470358	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6470359	0.92[ASN][1000 genomes]
rs6987702	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6989280	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7005535	0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7846135	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8180991	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126496600-126499400	Enhancers	Placenta	Placenta
2	chr8:126496600-126503000	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr8:126497200-126500600	Enhancers	Liver	Liver
4	chr8:126497200-126500800	Enhancers	HepG2	liver
5	chr8:126497200-126501800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr8:126497600-126499000	Enhancers	Primary B cells from cord blood	blood
7	chr8:126497600-126501600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr8:126497800-126501600	Weak transcription	NHEK	skin
9	chr8:126498600-126509200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr8:126498600-126509800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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