Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:126441301..126442838-chr8:126502180..126504395,2	MCF-7	breast:
2	chr8:126487669..126490463-chr8:126500662..126505453,4	MCF-7	breast:
3	chr8:126502943..126504675-chr8:126590654..126593231,2	K562	blood:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12544593	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12545963	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12677676	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12679184	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12679547	0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs13258507	0.92[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13265432	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs13271368	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17406109	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs34087092	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34417638	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34604874	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs35309034	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4567057	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4567059	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4592055	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4870941	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4870942	0.84[EUR][1000 genomes]
rs6989280	0.82[EUR][1000 genomes]
rs7015677	0.84[ASN][1000 genomes]
rs7828194	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7828701	0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7846135	0.86[EUR][1000 genomes]
rs8180991	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126498600-126509200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:126498600-126509800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:126502200-126509800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:126502600-126504200	Enhancers	Liver	Liver
5	chr8:126503000-126504000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
6	chr8:126503000-126504200	Enhancers	Adipose Nuclei	Adipose
7	chr8:126503000-126504400	Enhancers	Placenta	Placenta
8	chr8:126503200-126504200	Enhancers	Primary B cells from cord blood	blood
9	chr8:126503600-126505000	Weak transcription	Primary hematopoietic stem cells	blood
10	chr8:126503800-126504200	Enhancers	HepG2	liver

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