Variant report

Variant	rs4370841
Chromosome Location	chr10:91324293-91324294
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11185761	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12411659	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12411692	0.89[EUR][1000 genomes]
rs12412483	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12414275	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs12414975	0.85[AMR][1000 genomes]
rs12415553	1.00[AFR][1000 genomes]
rs17123580	1.00[AFR][1000 genomes]
rs1998842	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs3758386	1.00[AFR][1000 genomes]
rs3824608	1.00[AFR][1000 genomes]
rs4934487	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4934488	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs58016375	1.00[AFR][1000 genomes]
rs7080059	0.95[ASN][1000 genomes]
rs7083585	0.95[ASN][1000 genomes]
rs7392559	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041964	chr10:90861380-91378356	Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91313600-91324600	Weak transcription	Aorta	Aorta
2	chr10:91314600-91324600	Weak transcription	Pancreas	Pancrea
3	chr10:91322800-91325000	Enhancers	Fetal Intestine Small	intestine
4	chr10:91323400-91324600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr10:91323400-91325200	Enhancers	Liver	Liver
6	chr10:91324000-91325000	Enhancers	Fetal Stomach	stomach
7	chr10:91324000-91326800	Weak transcription	HSMM	muscle
8	chr10:91324000-91327000	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr10:91324200-91324400	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr10:91324200-91324800	Enhancers	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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