Variant report

Variant	rs4382437
Chromosome Location	chr8:130650048-130650049
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130649580..130655005-chr8:130656541..130661104,6	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10099422	0.90[ASN][1000 genomes]
rs10101101	0.81[EUR][1000 genomes]
rs12707937	0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs13256760	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs13263733	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.84[MEX][hapmap];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs13264700	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs13265576	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13267039	0.93[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.82[ASN][1000 genomes]
rs13267746	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13280368	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34092021	0.96[ASN][1000 genomes]
rs34319381	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34390591	0.82[ASN][1000 genomes]
rs34716000	0.88[ASN][1000 genomes]
rs34865413	0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs35125576	0.82[ASN][1000 genomes]
rs35226520	0.88[ASN][1000 genomes]
rs35509786	0.90[ASN][1000 genomes]
rs35577995	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35778967	0.91[ASN][1000 genomes]
rs56049814	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs59672682	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60812642	0.89[ASN][1000 genomes]
rs62523768	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs66910128	0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs67986379	0.92[ASN][1000 genomes]
rs68077667	0.91[ASN][1000 genomes]
rs6998742	0.90[ASN][1000 genomes]
rs7004790	0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs72716385	0.91[ASN][1000 genomes]
rs7841674	0.81[ASN][1000 genomes]
rs9297796	1.00[CHB][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs9918807	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv612230	chr8:130624121-130661901	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130636800-130651600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr8:130640200-130651600	Weak transcription	Fetal Muscle Leg	muscle
3	chr8:130648600-130650200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr8:130649000-130650200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr8:130650000-130650200	Enhancers	K562	blood
6	chr8:130650000-130651400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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