Variant report

Variant	rs439052
Chromosome Location	chr9:97569038-97569039
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MEF2C	chr9:97568685-97569274	GM12878	blood:	n/a	chr9:97568989-97569004
2	WRNIP1	chr9:97568735-97569462	GM12878	blood:	n/a	n/a
3	FOSL2	chr9:97567098-97569122	A549	lung:	n/a	chr9:97567376-97567386 chr9:97567513-97567522 chr9:97567380-97567392 chr9:97567376-97567386 chr9:97567376-97567386
4	EP300	chr9:97567029-97569433	A549	lung:	n/a	chr9:97567931-97567945 chr9:97567451-97567465 chr9:97569185-97569194
5	MAX	chr9:97567939-97569247	A549	lung:	n/a	n/a
6	NFIC	chr9:97568716-97569490	GM12878	blood:	n/a	n/a
7	EBF1	chr9:97568794-97569257	GM12878	blood:	n/a	n/a
8	POLR2A	chr9:97567202-97569111	MCF10A-Er-Src	breast:	n/a	n/a
9	GATA3	chr9:97567446-97569198	A549	lung:	n/a	chr9:97568112-97568122 chr9:97568106-97568127 chr9:97568113-97568122 chr9:97568113-97568120 chr9:97568113-97568120 chr9:97568879-97568890 chr9:97568113-97568120
10	EP300	chr9:97568010-97569115	GM12878	blood:	n/a	n/a
11	BCL3	chr9:97567493-97569160	A549	lung:	n/a	chr9:97568948-97568957
12	MAX	chr9:97568492-97569038	A549	lung:	n/a	n/a
13	TCF12	chr9:97566983-97569593	A549	lung:	n/a	chr9:97567573-97567580
14	EP300	chr9:97567346-97569062	A549	lung:	n/a	chr9:97567931-97567945 chr9:97567451-97567465
15	MEF2A	chr9:97568622-97569261	GM12878	blood:	n/a	n/a
16	BHLHE40	chr9:97568660-97569130	A549	lung:	n/a	n/a
17	REST	chr9:97567630-97569340	A549	lung:	n/a	chr9:97568490-97568510 chr9:97568496-97568510
18	YY1	chr9:97569014-97569530	GM12878	blood:	n/a	n/a
19	PRDM1	chr9:97568804-97569310	Hela-S3	cervix:	n/a	chr9:97568872-97568887
20	POLR2A	chr9:97568997-97569299	GM12891	blood:	n/a	n/a
21	POLR2A	chr9:97567809-97569158	MCF10A-Er-Src	breast:	n/a	n/a
22	SP1	chr9:97567028-97569073	A549	lung:	n/a	n/a
23	NFIC	chr9:97568662-97569284	GM12878	blood:	n/a	n/a
24	SP1	chr9:97567143-97569062	A549	lung:	n/a	n/a
25	MAX	chr9:97567024-97569123	A549	lung:	n/a	n/a
26	RELA	chr9:97568388-97569350	GM19193	blood:	n/a	chr9:97568947-97568956 chr9:97568947-97568956
27	BHLHE40	chr9:97568622-97569129	GM12878	blood:	n/a	n/a
28	EP300	chr9:97568609-97569258	GM12878	blood:	n/a	chr9:97569185-97569194
29	RELA	chr9:97568721-97569409	GM10847	blood:	n/a	chr9:97568947-97568956 chr9:97568947-97568956
30	YY1	chr9:97568942-97569494	GM12878	blood:	n/a	n/a
31	MEF2A	chr9:97568674-97569312	GM12878	blood:	n/a	n/a
32	YY1	chr9:97568981-97569327	GM12891	blood:	n/a	n/a
33	MTA3	chr9:97568236-97569350	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:97563933..97571351-chr9:97576672..97582632,18	MCF-7	breast:
2	chr9:97567997..97570144-chr9:97641806..97644523,2	MCF-7	breast:
3	chr9:97565914..97571490-chr9:97674207..97687450,22	MCF-7	breast:
4	chr9:97568528..97571106-chr9:97583022..97584676,2	MCF-7	breast:
5	chr9:97566500..97569295-chr9:97687773..97689488,3	MCF-7	breast:
6	chr9:97568707..97571260-chr9:97810140..97811755,2	MCF-7	breast:
7	chr9:97544027..97547289-chr9:97566089..97570297,6	MCF-7	breast:
8	chr9:97562492..97588737-chr9:97670126..97691056,102	MCF-7	breast:
9	chr9:97567267..97570161-chr9:97772794..97775728,2	MCF-7	breast:
10	chr9:97545480..97547938-chr9:97567296..97570948,4	MCF-7	breast:

Variant related genes	Relation type
MIR2278	TF binding region
ENSG00000148120	Chromatin interaction

Extended variants
information (count: 110 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:109)

rs_ID	r²[population]
rs10121865	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10122127	0.82[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10217427	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10732405	0.80[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10732406	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10733755	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10739986	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10761355	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10761359	0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10821405	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10993348	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10993351	0.90[CEU][hapmap];0.96[YRI][hapmap]
rs1228614	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12339275	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12340251	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12344537	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12352276	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12553690	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12684703	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13285343	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1530331	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs16911661	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1810772	0.92[EUR][1000 genomes]
rs181488	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs187163	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs193292	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2119954	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2165716	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2304884	0.82[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2406898	0.83[YRI][hapmap]
rs2406899	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs242259	0.91[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2584803	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2584804	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2767403	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767404	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28647286	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34940574	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs356122	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs356123	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs356124	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs356126	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs356127	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs356129	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs356130	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs356134	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs356135	0.80[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs356137	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs356138	0.88[JPT][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs356140	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs356142	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs356143	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs356146	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs374708	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs376902	0.80[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs380205	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs384039	0.82[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3858087	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3858088	0.88[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs389365	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs396538	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs397617	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs400231	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs405110	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs415016	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs418764	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4437717	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4537361	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs471161	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4744377	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4744379	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4744380	0.80[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4744383	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4744387	0.84[AFR][1000 genomes]
rs55795862	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55914113	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55926255	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57504746	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58042095	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6479565	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6479570	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6479571	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6479572	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6479574	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6479576	0.88[YRI][hapmap]
rs672012	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67625382	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7025234	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7025934	0.90[YRI][hapmap]
rs7026714	0.87[YRI][hapmap]
rs7028317	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7030617	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7031172	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7031518	0.87[AMR][1000 genomes]
rs7035166	0.90[YRI][hapmap]
rs7037652	0.88[AFR][1000 genomes]
rs7038519	0.87[YRI][hapmap]
rs7041982	0.87[EUR][1000 genomes]
rs7045387	0.82[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7047864	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs732141	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7853126	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7861358	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7862700	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7869666	0.80[CEU][hapmap];0.82[AMR][1000 genomes]
rs7870679	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs894428	0.88[YRI][hapmap]
rs913182	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9409806	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893596	chr9:97321172-97598966	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs439052	hCG_2003663	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:118 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:97548600-97570400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr9:97550200-97571200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr9:97556800-97575800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr9:97560400-97570000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr9:97562000-97572800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr9:97562200-97571200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr9:97563400-97584200	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr9:97563600-97569200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr9:97563600-97569600	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr9:97563600-97594400	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr9:97563800-97569200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr9:97563800-97569400	Weak transcription	Right Ventricle	heart
13	chr9:97563800-97569600	Weak transcription	Fetal Muscle Trunk	muscle
14	chr9:97563800-97569800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr9:97563800-97569800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr9:97563800-97569800	Weak transcription	Fetal Stomach	stomach
17	chr9:97563800-97570200	Weak transcription	Lung	lung
18	chr9:97563800-97570400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr9:97563800-97570800	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr9:97563800-97573400	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr9:97563800-97573800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
22	chr9:97563800-97574600	Weak transcription	Colon Smooth Muscle	Colon
23	chr9:97563800-97579600	Weak transcription	Gastric	stomach
24	chr9:97563800-97584200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr9:97564000-97569600	Enhancers	Brain Cingulate Gyrus	brain
26	chr9:97564000-97574400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr9:97564000-97574400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr9:97564000-97574600	Weak transcription	Stomach Smooth Muscle	stomach
29	chr9:97564000-97580000	Weak transcription	Primary B cells from peripheral blood	blood
30	chr9:97564000-97589200	Weak transcription	Primary T helper cells fromperipheralblood	blood
31	chr9:97564200-97569200	Weak transcription	Dnd41	blood
32	chr9:97564200-97580400	Weak transcription	K562	blood
33	chr9:97565000-97569200	Weak transcription	Primary B cells from cord blood	blood
34	chr9:97565200-97572200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
35	chr9:97565200-97587000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr9:97565400-97572200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr9:97565400-97572200	Weak transcription	Esophagus	oesophagus
38	chr9:97565400-97584200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr9:97565800-97569600	Enhancers	Breast Myoepithelial Primary Cells	Breast
40	chr9:97566000-97569200	Enhancers	Fetal Intestine Small	intestine
41	chr9:97566000-97569200	Enhancers	Fetal Muscle Leg	muscle
42	chr9:97566000-97569400	Genic enhancers	HSMM	muscle
43	chr9:97566000-97569600	Enhancers	Sigmoid Colon	Sigmoid Colon
44	chr9:97566200-97569400	Enhancers	Brain Germinal Matrix	brain
45	chr9:97566200-97569600	Enhancers	Brain Anterior Caudate	brain
46	chr9:97566400-97569400	Enhancers	Stomach Mucosa	stomach
47	chr9:97566600-97569400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr9:97566600-97569400	Enhancers	Placenta	Placenta
49	chr9:97566800-97569800	Enhancers	HMEC	breast
50	chr9:97567000-97569200	Enhancers	Primary hematopoietic stem cells short term culture	blood

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