Variant report
| Variant | rs4399859 |
|---|---|
| Chromosome Location | chr3:42832410-42832411 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:42814800-42840800 | Weak transcription | Spleen | Spleen |
| 2 | chr3:42815000-42834800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr3:42815200-42834800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr3:42815200-42834800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 5 | chr3:42815200-42834800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr3:42815200-42834800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 7 | chr3:42815200-42834800 | Weak transcription | Fetal Muscle Leg | muscle |
| 8 | chr3:42815200-42834800 | Weak transcription | Ovary | ovary |
| 9 | chr3:42815200-42834800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 10 | chr3:42815200-42834800 | Weak transcription | A549 | lung |
| 11 | chr3:42815200-42835200 | Weak transcription | Right Ventricle | heart |
| 12 | chr3:42815200-42836400 | Weak transcription | Brain Hippocampus Middle | brain |
| 13 | chr3:42815200-42837400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr3:42815200-42842000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 15 | chr3:42815200-42842200 | Weak transcription | Aorta | Aorta |
| 16 | chr3:42815200-42842400 | Weak transcription | Psoas Muscle | Psoas |
| 17 | chr3:42815400-42833600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 18 | chr3:42815400-42834400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 19 | chr3:42815400-42834800 | Weak transcription | Brain Germinal Matrix | brain |
| 20 | chr3:42815400-42837200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 21 | chr3:42815400-42844000 | Weak transcription | NHDF-Ad | bronchial |
| 22 | chr3:42815600-42841800 | Weak transcription | Thymus | Thymus |
| 23 | chr3:42815600-42842000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 24 | chr3:42815600-42842000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 25 | chr3:42816200-42837600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 26 | chr3:42820400-42834800 | Weak transcription | HSMMtube | muscle |
| 27 | chr3:42821400-42837400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr3:42821800-42834800 | Weak transcription | Esophagus | oesophagus |
| 29 | chr3:42821800-42834800 | Weak transcription | Pancreas | Pancrea |
| 30 | chr3:42822000-42841200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 31 | chr3:42822400-42834800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr3:42822400-42834800 | Weak transcription | NHLF | lung |
| 33 | chr3:42822400-42837200 | Weak transcription | Brain Angular Gyrus | brain |
| 34 | chr3:42822400-42843400 | Weak transcription | Small Intestine | intestine |
| 35 | chr3:42822800-42834800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 36 | chr3:42822800-42837000 | Weak transcription | Brain Anterior Caudate | brain |
| 37 | chr3:42822800-42841600 | Weak transcription | Brain Substantia Nigra | brain |
| 38 | chr3:42822800-42842800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 39 | chr3:42822800-42844000 | Weak transcription | Fetal Kidney | kidney |
| 40 | chr3:42822800-42844200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 41 | chr3:42823000-42842800 | Weak transcription | Fetal Brain Male | brain |
| 42 | chr3:42823600-42834800 | Weak transcription | Colonic Mucosa | Colon |
| 43 | chr3:42823600-42836400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 44 | chr3:42824000-42835400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 45 | chr3:42824000-42836400 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 46 | chr3:42824400-42836400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 47 | chr3:42825000-42834800 | Weak transcription | Fetal Brain Female | brain |
| 48 | chr3:42825200-42834800 | Weak transcription | Primary T cells from cord blood | blood |
| 49 | chr3:42825200-42834800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 50 | chr3:42825200-42843800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
