Variant report

Variant	rs4413480
Chromosome Location	chr4:107408387-107408388
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs12506993	0.81[AFR][1000 genomes]
rs13113961	0.93[EUR][1000 genomes]
rs13148020	0.85[ASN][1000 genomes]
rs13148463	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1522207	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17355932	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs2280631	0.93[EUR][1000 genomes]
rs3108142	0.85[CEU][hapmap]
rs3108144	0.88[EUR][1000 genomes]
rs3108145	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs4956257	0.95[EUR][1000 genomes]
rs6819528	0.90[EUR][1000 genomes]
rs6825451	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6850696	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7673683	0.92[EUR][1000 genomes]
rs7691063	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs940617	1.00[CEU][hapmap];0.88[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107407200-107408600	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr4:107407400-107409200	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr4:107407600-107408400	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr4:107407600-107408800	Enhancers	H1 Cell Line	embryonic stem cell
5	chr4:107407600-107408800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr4:107407600-107409000	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr4:107407600-107409000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr4:107407800-107408400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr4:107407800-107408600	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr4:107408000-107408400	Enhancers	H9 Cell Line	embryonic stem cell
11	chr4:107408000-107408400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr4:107408000-107409000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr4:107408000-107409000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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