Variant report

Variant rs4449
Chromosome Location chr22:33278202-33278203
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33237400-33282200 Weak transcription Fetal Brain Female brain
2 chr22:33257800-33282000 Weak transcription HepG2 liver
3 chr22:33265200-33282000 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr22:33265600-33287000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr22:33270800-33287200 Weak transcription H1 Cell Line embryonic stem cell
6 chr22:33274200-33286200 Enhancers Fetal Heart heart
7 chr22:33275000-33280200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr22:33275400-33279600 Enhancers Primary hematopoietic stem cells blood
9 chr22:33275400-33279600 Enhancers Fetal Muscle Leg muscle
10 chr22:33275400-33285400 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr22:33275800-33284000 Enhancers Fetal Stomach stomach
12 chr22:33276000-33279600 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr22:33276200-33278400 Enhancers Placenta Placenta
14 chr22:33276200-33279000 Enhancers Fetal Muscle Trunk muscle
15 chr22:33276200-33279400 Enhancers Fetal Lung lung
16 chr22:33276800-33278400 Enhancers Primary B cells from peripheral blood blood
17 chr22:33276800-33278400 Bivalent Enhancer Primary T cells fromperipheralblood blood
18 chr22:33276800-33279200 Enhancers Fetal Brain Male brain
19 chr22:33277000-33284800 Weak transcription Ovary ovary
20 chr22:33277000-33302000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr22:33277400-33278600 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr22:33277600-33278400 Active TSS Primary T cells from cord blood blood
23 chr22:33277600-33278600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr22:33277600-33278600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr22:33277600-33278800 Weak transcription Brain Germinal Matrix brain
26 chr22:33277600-33279000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr22:33277600-33280000 Enhancers Fetal Thymus thymus
28 chr22:33277600-33282800 Weak transcription Right Atrium heart
29 chr22:33277600-33283800 Weak transcription HSMMtube muscle
30 chr22:33277600-33285000 Weak transcription Left Ventricle heart
31 chr22:33278000-33278400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
32 chr22:33278000-33278400 Enhancers Primary neutrophils fromperipheralblood blood
33 chr22:33278000-33278400 Active TSS Primary T helper naive cells from peripheral blood blood
34 chr22:33278000-33278400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
35 chr22:33278000-33278400 Active TSS Primary T killer memory cells from peripheral blood blood
36 chr22:33278000-33278400 Flanking Active TSS Thymus Thymus
37 chr22:33278000-33278800 Enhancers Fetal Kidney kidney
38 chr22:33278200-33278400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr22:33278200-33278400 Active TSS Primary T helper cells PMA-I stimulated --
40 chr22:33278200-33278600 Active TSS Primary T helper naive cells fromperipheralblood blood
41 chr22:33278200-33278600 Flanking Active TSS K562 blood
42 chr22:33278200-33283400 Weak transcription Right Ventricle heart

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