Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:139818128..139821067-chr3:139825810..139829205,3	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10513099	1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12494072	1.00[CHB][hapmap]
rs16849957	1.00[CHB][hapmap]
rs2280336	1.00[MEX][hapmap];0.88[TSI][hapmap];0.88[EUR][1000 genomes]
rs2882425	0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs4428137	1.00[CHB][hapmap]
rs4600787	0.88[TSI][hapmap];0.88[EUR][1000 genomes]
rs58656999	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60260333	0.85[EUR][1000 genomes]
rs60313064	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6439896	1.00[CHB][hapmap]
rs6767558	1.00[CHB][hapmap]
rs6787267	0.87[YRI][hapmap]
rs6799894	1.00[CHB][hapmap]
rs6807785	1.00[CHB][hapmap]
rs72984144	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72984150	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72984173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72984176	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7619286	0.88[TSI][hapmap];0.88[EUR][1000 genomes]
rs7624316	0.88[EUR][1000 genomes]
rs7645419	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998423	chr3:139526446-139947336	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv829738	chr3:139670836-139851945	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv829739	chr3:139797496-140002685	Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:139813800-139832600	Weak transcription	Ovary	ovary
2	chr3:139822400-139834600	Weak transcription	HSMMtube	muscle

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