The 2.0 version of rSNPBase

Variant report

Variant rs4474031
Chromosome Location chr8:122640026-122640027
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:122615200-122644000 Weak transcription Fetal Brain Male brain
2 chr8:122616000-122640200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr8:122624800-122640800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr8:122626800-122643800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr8:122627400-122649800 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr8:122629800-122641000 Weak transcription Fetal Muscle Trunk muscle
7 chr8:122632000-122648800 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr8:122636000-122642600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr8:122636600-122640200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr8:122636600-122644000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr8:122636800-122640800 Weak transcription NH-A brain
12 chr8:122636800-122647600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr8:122637000-122640800 Weak transcription A549 lung
14 chr8:122637000-122643000 Strong transcription Muscle Satellite Cultured Cells --
15 chr8:122637600-122642200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr8:122637800-122640200 Weak transcription Brain Cingulate Gyrus brain
17 chr8:122638000-122640800 Flanking Active TSS NHDF-Ad bronchial
18 chr8:122638000-122641800 Genic enhancers Fetal Lung lung
19 chr8:122638000-122643600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr8:122638200-122642000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr8:122638600-122640400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr8:122638600-122641200 Genic enhancers HSMM muscle
23 chr8:122638600-122641400 Enhancers Brain Substantia Nigra brain
24 chr8:122638800-122641000 Enhancers Brain Hippocampus Middle brain
25 chr8:122638800-122642600 Strong transcription HUES6 Cell Line embryonic stem cell
26 chr8:122639000-122640200 Genic enhancers NHLF lung
27 chr8:122639000-122640600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr8:122639000-122640600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr8:122639000-122640800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr8:122639000-122643800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr8:122639000-122644000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr8:122639000-122644200 Genic enhancers Osteobl bone
33 chr8:122639200-122640200 Weak transcription HSMMtube muscle
34 chr8:122639200-122643000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr8:122639200-122644200 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr8:122639200-122651400 Weak transcription Brain Anterior Caudate brain
37 chr8:122639400-122644000 Weak transcription Fetal Stomach stomach
38 chr8:122639800-122640400 Enhancers Fetal Muscle Leg muscle
39 chr8:122640000-122640400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr8:122640000-122641000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr8:122640000-122641200 Enhancers Brain Inferior Temporal Lobe brain
42 chr8:122640000-122643800 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015