Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:157322188..157324085-chr3:157326033..157328110,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11914492	0.83[ASN][1000 genomes]
rs12696052	0.89[ASN][1000 genomes]
rs4395360	0.90[CHB][hapmap];0.86[CHD][hapmap]
rs4472012	0.90[CHB][hapmap];0.81[CHD][hapmap]
rs4518078	0.86[EUR][1000 genomes]
rs4596103	0.86[ASN][1000 genomes]
rs4680382	0.90[ASN][1000 genomes]
rs4680383	0.90[ASN][1000 genomes]
rs4680385	0.87[EUR][1000 genomes]
rs6414386	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6764890	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6768486	0.87[EUR][1000 genomes]
rs6792250	0.95[CHB][hapmap]
rs6804583	0.86[ASN][1000 genomes]
rs9289986	0.95[CHB][hapmap];0.86[CHD][hapmap]
rs9289987	0.95[CHB][hapmap]
rs9289989	0.88[ASN][1000 genomes]
rs9812718	0.95[CHB][hapmap];0.88[CHD][hapmap]
rs9817096	0.95[CHB][hapmap];0.85[CHD][hapmap]
rs9837954	0.90[CHB][hapmap];0.88[CHD][hapmap]
rs9838074	0.90[CHB][hapmap];0.86[CHD][hapmap]
rs9870015	0.90[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829767	chr3:157306411-157490444	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv4081	chr3:157318466-157347655	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157323400-157324400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr3:157323400-157324800	Enhancers	Fetal Brain Male	brain
3	chr3:157323600-157325600	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr3:157323800-157324200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr3:157323800-157324800	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr3:157323800-157325800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr3:157323800-157326200	Enhancers	Brain Germinal Matrix	brain
8	chr3:157324000-157324200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr3:157324000-157324400	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr3:157324000-157324400	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr3:157324000-157324400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr3:157324000-157324400	Enhancers	Brain Cingulate Gyrus	brain
13	chr3:157324000-157324400	Enhancers	Osteobl	bone
14	chr3:157324000-157324800	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr3:157324000-157324800	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr3:157324000-157324800	Enhancers	Brain Anterior Caudate	brain
17	chr3:157324000-157324800	Enhancers	Skeletal Muscle Male	skeletal muscle
18	chr3:157324000-157326600	Enhancers	Primary hematopoietic stem cells short term culture	blood

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