The 2.0 version of rSNPBase

Variant report

Variant rs4523531
Chromosome Location chr1:161348736-161348737
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161321800-161348800 Weak transcription Gastric stomach
2 chr1:161327400-161352600 Weak transcription Lung lung
3 chr1:161328400-161359000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:161328600-161359000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:161335000-161356000 Weak transcription K562 blood
6 chr1:161336400-161348800 Weak transcription Placenta Placenta
7 chr1:161336600-161351600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:161336600-161352200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:161336600-161352200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:161336800-161348800 Weak transcription Fetal Muscle Leg muscle
11 chr1:161336800-161348800 Weak transcription Fetal Thymus thymus
12 chr1:161336800-161351600 Weak transcription NHEK skin
13 chr1:161337800-161348800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:161337800-161356200 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr1:161338000-161351600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:161338000-161356000 Weak transcription GM12878-XiMat blood
17 chr1:161344400-161348800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:161344600-161348800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:161347000-161351600 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:161347000-161352200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:161348200-161351600 Weak transcription A549 lung
22 chr1:161348200-161351600 Weak transcription HepG2 liver
23 chr1:161348600-161348800 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr1:161348600-161349000 Active TSS Duodenum Smooth Muscle Duodenum
25 chr1:161348600-161349200 Active TSS Breast Myoepithelial Primary Cells Breast
26 chr1:161348600-161349400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:161348600-161349400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:161348600-161349400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:161348600-161349400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:161348600-161349400 Active TSS Fetal Kidney kidney

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Last update: Aug 31, 2015